Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq26065 107 2e-18
seq29163 93.3 4e-14
seq6126 87.8 2e-12
seq58749 84.2 2e-11
>seq26065
Length=1373002
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || || || | ||||| ||||| || | ||| ||||| | ||||| ||| |
Sbjct 1017728 CTTCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGTCCTCTTTTCT 1017669
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| ||||| |||||||| ||||| || |||||||| || || ||||| |||||||
Sbjct 1017668 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1017609
Query 23651 CCAC 23654
||||
Sbjct 1017608 CCAC 1017605
>seq29163
Length=2664742
Score = 93.3 bits (102), Expect = 4e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
|| || || ||||| | |||||| ||||| || | || ||||| | ||||||||| ||
Sbjct 301515 TCGTCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 301456
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| ||||| | ||||| || ||||||||||| || || || || || ||||||||
Sbjct 301455 AGCCAGAATATAGACGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 301396
Query 23653 ACAAGACGT 23661
|| | ||||
Sbjct 301395 ACCACACGT 301387
>seq6126
Length=725546
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 8390 CACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCT 8449
||||||| ||| |||| | | |||||| || ||||||||||||||||| ||||||||
Sbjct 434973 CACTGCAGCCTAGAACTCCTGAGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCT 434914
Query 8450 GGGATTACAGGCAAAAGCCACCA 8472
|||| |||||||| ||||||||
Sbjct 434913 GGGACTACAGGCACGAGCCACCA 434891
>seq58749
Length=2680103
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446
|| ||||||| || |||| | | |||||| || |||| |||||||||||| |||||
Sbjct 1854185 GCGCACTGCAGCCCAGAACTCCTGAGCTCAAGCGATCCTCCAGCCTCAGCCTCCCGAGTA 1854244
Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGA 8502
||||||| ||||||| |||||| |||| || | ||||||||||| ||||
Sbjct 1854245 GCTGGGACTACAGGCGCGCGCCACCGCGCCCGGCAGAACATTGTATTTTTAATAGA 1854300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520983981848000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |