Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20acutorostrata_20scammoni_20[refseq_20GCF_5F000493695. 1_202013-10-31] 10,776 sequences; 2,431,687,698 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq5888 82.4 5e-11 seq2941 82.4 5e-11 >seq5888 Length=21378709 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| || | ||| |||||||||||||| ||||| |||||| | ||| || | || | Sbjct 13335973 ACCAGCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACT 13335914 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||| ||||| ||||| |||||||||||| | ||| Sbjct 13335913 ACAACATTCAAAAGGAGTCTACTCTTCATCTTGTA 13335879 >seq2941 Length=1025224 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| || ||||| |||||||||||||| ||||| |||||| | ||| || | || | Sbjct 785835 ACCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACT 785894 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||| ||||| ||||| || ||||||||| | ||| Sbjct 785895 ACAACATTCAAAAGGAGTCCACTCTTCATCTTGTA 785929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358077766574704