Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20acutorostrata_20scammoni_20[refseq_20GCF_5F000493695. 1_202013-10-31] 10,776 sequences; 2,431,687,698 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq7777 266 2e-65 seq225 260 1e-63 seq6110 176 3e-38 seq1852 167 2e-35 seq1964 109 4e-18 seq9554 104 2e-16 seq1563 95.1 9e-14 >seq7777 Length=14049408 Score = 266 bits (294), Expect = 2e-65 Identities = 805/1223 (66%), Gaps = 23/1223 (2%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||||| || ||||| | ||| | ||||||||| ||||||| | || | Sbjct 9596576 GTCATGACTCCACCCGCAGTTTCAATTCCACGGGAAAGAGGACTGACATCCAACAGCAGC 9596517 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | | ||||| |||||| | | ||| ||||| ||||| || | ||| |||||| Sbjct 9596516 AAGTCTTGAACATTTTCAGATTTGTCTCCAGATAGAATGGCTGCCTGGACAGCTGCACCA 9596457 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || |||||||| |||||||| || | | | ||| |||| ||| || ||||| || | Sbjct 9596456 TAAGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTCCCGTTGAAGAAGTCC 9596397 Query 281843 GAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 ||||||| ||| | ||| || || || | ||| || || || | ||||| ||||| Sbjct 9596396 TGTAGAAGTT-TCTGATTCTTGGGGATGCGGGTTGAACCACCCACCAGGACAATATCATG 9596338 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | ||| || || || || || | |||| | |||| || || || || || | Sbjct 9596337 GATCTGAGACTTGTCTAGCTTGGCATCCCGAAGGGCTTTCTCCACAGGGTCCAGTGTGCC 9596278 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 |||| ||| | | |||||||| ||| || | |||| | | || | || Sbjct 9596277 ATGGAACAGGTCAGCATTCAGTTCTTCAAATCGGGCACGGGTAATTGAGGTATAGAAGTC 9596218 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 |||||||| | | ||||||| ||||| || | || || |||||||| | | Sbjct 9596217 GATTCCTTCACAGAGGGAATCAATCTCAATAGTGGCCTGGGTGCTGGAAGATAGAGTGTG 9596158 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AGGCTT-TTG--CTGATTGATTCA 282137 |||||| | ||||| || || | || | || | || ||| ||| || | |||| | Sbjct 9596157 CTTAGCATGCTCACAAGCAGTACGAAGGCGACGGACAGCCTTCTTGTTCTCACTGATGCC 9596098 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 282195 ||| | | || | |||||| ||| | | | | ||| | || | || || || Sbjct 9596097 CTTCT----TGTGCTTGCACTTGAACTCTGCGATAAA--ATGGTTGACCATCCGGTTGTC 9596044 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||| ||||| || || || | |||| ||| | |||| | || | || | |||||| Sbjct 9596043 AAAGTCTTCTCCACCTAAGTGGGTATCTCCAGCTGTAGACTTCACCTCAAAGATTCCATC 9595984 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 |||| || | | | |||||| || |||||||| | |||||| || || ||||| Sbjct 9595983 CTCAATAGTGAGGACTGACACATCAAAAGTGCCACCACCTAAATCAAAGATCAGCACATT 9595924 Query 282316 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 ||||| | ||||| || | |||| |||| ||||||||||||||| || || Sbjct 9595923 TCTTTCTGCTCCAATCTTTTTGTCTAAGTCATAGGCAACAGCAGCAGCAGTTGGCTCGTT 9595864 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 || ||||| | ||||| || |||||||| |||| |||||||| || || || || Sbjct 9595863 GATGATTCTAAGTACATTGAGCCCAGCAATAGTTCCAGCATCTTTGGTAGCCTGATGCTG 9595804 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 || || ||||| || ||||| || || | ||| |||| || || || |||| || Sbjct 9595803 AGAGTCATTAAAGTAAGCAGGTACTGTGACAACAGCATTGGTAACAGTCTTCCCAAGGTA 9595744 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA-AT 282554 || |||| ||| ||||| || | |||| ||| ||||| | | |||||| | | Sbjct 9595743 GGCTTCTGCTATTTCCTTCATCTTTGTCAAAACCATGGATGACACCTCCTCTGGATAGAA 9595684 Query 282555 ATTGCTTGGATTCATTTTGATATGATACTTCAA-AATATGGTTTATTACCAACATTAATA 282613 | | ||| | ||| ||| ||||| || ||| || | | |||| | Sbjct 9595683 ACTTTTTGTCTCTCCCTTG-TATTCTACTTGAACCATA-GGCCTGCCTGAATCATTCACC 9595626 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT-ACC 282672 ||| |||| ||||||| |||||| | || || ||| | ||| | |||||| | || Sbjct 9595625 ACTATAAAGGGCCAATGCTTCATACCAGACTGGACA-ACAGATCA-TCAAATCTTTGTCC 9595568 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| | ||||| ||||||||| || ||||| ||||| |||| |||| | || || Sbjct 9595567 AATGAGGCGTTTGGCATCAAAACCCGTGTTGGTGGGATT-CTTGCAACTTGGTTCTTTGC 9595509 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 ||||| | ||||| ||| || || ||||| | ||||| ||| || || || || Sbjct 9595508 AGCATCACAAATCAATCATTCGGTATCAGTAAAGGTGACATAACTTGGGGTAGTTCGGTT 9595449 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 || |||||| | ||||| ||||| || || || | || | | | | |||||| || Sbjct 9595448 CCCCTGATCACTGGCAATTATTTCCACCTTTCCGTGCTGGAAGATAACCACACAA-GAAT 9595390 Query 282853 AGTTGTTCCTAAATCAATACCAA 282875 || || | | | |||||| |||| Sbjct 9595389 AGGTGGTGCAAGATCAATGCCAA 9595367 >seq225 Length=8803752 Score = 260 bits (288), Expect = 1e-63 Identities = 956/1481 (65%), Gaps = 37/1481 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| ||| | || || |||||||||| | |||||| ||||||||||| Sbjct 3981143 TTATCCACAGCAGAGACACTGAGGATGACATTGGCATCAATATCAAAAGTGACTTCAATC 3981084 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | | ||||| || || ||| | | ||| || || || Sbjct 3981083 TGAGGAACACCACGGGGGGCAGGAGGTATGCCTGTGAGTTCAAACTCGCCAAGTAGGTTG 3981024 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATT 281595 |||||||| || | | ||| | || ||| || || |||| | | | || || Sbjct 3981023 TTATCTTTGGTCATGGCATGCTCATCTTCATAAACCTGAATGAGTA-CACCGGGCTGCTT 3980965 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654 ||||| || ||||| || |||| | || || ||||| || ||||| | | | Sbjct 3980964 GTCTGAGTAGGTTGTGAAGG-TCTGCGTCTTCTTGGTGGGAATGGTGGTGTTGCCCTTGA 3980906 Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAG-----------AGG 281703 | | ||||| | |||||||| ||||| | ||||| ||||| ||| Sbjct 3980905 TGAGGACAGTCATGACTCCACCAGCAGTTTCAATTCCAAGGGAAAGCCATGGGAAAGAGG 3980846 Query 281704 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 281763 ||||||||| | || | | | ||||| |||||| | | ||| ||||| || Sbjct 3980845 AGTGACATCCAACAGCAGCAAGTCTTGAACATTTTCAGATTTGTCTCCAGATAGAATGGC 3980786 Query 281764 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 281823 ||| || | ||| |||||||| |||||||| || ||||| || | | | ||| |||| Sbjct 3980785 TGCCTGGACAGCTGCACCATAAGCAACAGCCTCGTCAGGGTTGATGCTCTTATTCAGTTC 3980726 Query 281824 TTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTC 281882 ||| || ||||| | | ||||||| ||| | ||| || || || | ||| || | Sbjct 3980725 TTTCCCGTTGAAGGAGTCCTGTAGAAGTT-TCTGAATCTTGGGGATGCGGGTTGAACCAC 3980667 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 | || | ||||| ||||| | ||| || || || || || | |||| | | |||| | Sbjct 3980666 CCACCAGGACAATATCATGGATCTGAGACTTGTCTAGCTTGGCATCCCAAAGGGCTTTCT 3980607 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | || || || || | | |||| ||| | | |||||||| ||| || | | Sbjct 3980606 CCACAGGGTCCAGTGTGCCACGGAACAGGTCAGCATTCAGTTCTTCAAATCGGGCACGGG 3980547 Query 282003 TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG 282062 ||| | | || | || |||||||| | | ||||||| ||| | | | | | Sbjct 3980546 TAATTGAGGTATAGAAGTCGATTCCTTCATAGAGGGAATCAATCTCAGTACTGGCCAGGG 3980487 Query 282063 TC--GAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AGG 282119 | ||| ||| ||||| | |||||||| ||||| || || | || | || | || Sbjct 3980486 TGCTGAAAGAGAGAGTGCTC--TTAGCACGCTCACAAGCAGTACGAAGGCGACGGACAGC 3980429 Query 282120 CTT-TTG--CTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACC 282176 ||| ||| || | |||| || | | | || | |||||| ||| ||| | | Sbjct 3980428 CTTCTTGTTCTCACTGATG----TCCTTCTCGTGCTTGCGCTTGAATTCTGCAATAAA-- 3980375 Query 282177 ATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGC 282234 ||| | || | | || ||||| ||||| || || || | | || ||| | |||| Sbjct 3980374 ATGGTTGACCATCTGGTTGTCAAAGTCTTCTCCACCTAAGTGGGCATCTCCAGCTGTAGA 3980315 Query 282235 TCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACC 282294 | | || | || | |||||| |||| || | | | || ||| || |||||||| Sbjct 3980314 TTTGACCTCAAAGATTCCATCCTCAATAGTGAGGATTGACACCTCAAAAGTGCCACCACC 3980255 Query 282295 CATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAA 282354 | |||||| || || ||||| ||||| | ||||| || | ||||| |||| Sbjct 3980254 TAAATCAAAGATCAGCACATTTCTTTCTGCTCCAACCTTTTTGTCTAAGCCATAGGCAAT 3980195 Query 282355 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 282414 | ||||||||||||| || | | ||||| | ||||| || |||||||| |||| || Sbjct 3980194 AACAGCAGCAGTTGGCTCGT---TGATTCTAAGTACATTGAGCCCAGCAATAGTTCCAGC 3980138 Query 282415 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 |||||| || || || | || ||||| ||||| || || || || || | | | |||| Sbjct 3980137 ATCTTTGGTAGCCTGACGCTGAGAATCATTAAAGTAAGCGGGTACTGTGACAGCAGCATT 3980078 Query 282475 TGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGA 282534 || || || |||| | || |||| ||| ||||| || | |||| ||| || Sbjct 3980077 GGTAACAGTCTTCCCAAGGTGGGCTTCTGCTATTTCCTTCATCTTTGTCAAAACCATGGA 3980018 Query 282535 TGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG 282594 ||| | | |||||| || | || | || | ||| ||||| || | || Sbjct 3980017 TGACACCTCCTCTGGATAAAAACTTTTTGTCTCTCCCTTGTATTCTACTTGAACCTTAGG 3979958 Query 282595 TTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG 282654 | | | |||| | || | || ||||||| |||||||| || || ||| Sbjct 3979957 CCTGTCTGCGTCATTCACCACCATGAAGGGCCAATGCTTCATATCAGACTGGACAACAGC 3979898 Query 282655 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAC 282714 |||| ||| || ||||| | ||||| |||||||||| || ||||| ||||| | Sbjct 3979897 ATCATCAAATCTTCGTCCAATGAGGCGTTTGGCATCAAAAACCGTGTTGGTAGGATTCAT 3979838 Query 282715 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 282774 |||| |||| | | | || ||||| || |||| |||| || || ||||| | ||||| Sbjct 3979837 TGCAACTTGGT-TCTTGCAGCATCACCGATCAATCGTTCGGTATCAGTAAAGGCGACATA 3979779 Query 282775 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 282834 || || || | || ||||||||||| ||| | ||||| || || || | || | Sbjct 3979778 GCTAGGTGTAGTTTGGTTCCCTTGATCATTGGCAGTTATTTCCACCTTTCCGTGCTGGAA 3979719 Query 282835 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 ||||| |||||| | | || || || | |||||| |||| Sbjct 3979718 GACACCCACACAAGAATAGGTGGTGCCAAGATCAATGCCAA 3979678 >seq6110 Length=11399813 Score = 176 bits (194), Expect = 3e-38 Identities = 788/1233 (64%), Gaps = 48/1233 (4%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||||| || ||||| | ||| | ||||||||||||||||| | || | Sbjct 5872108 GTCATGACTCCACCCGCAGTTTCAATTCCACGGGAAAGAGGAGTGACATCCAACAGCAGC 5872049 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | | ||||| |||||| | || ||| ||||| ||||| || | ||| ||||| Sbjct 5872048 AAGTCTTGAACATTTTCAGATTTGTGTCCAGATAGAATGGCTGCCTGGACAGCTGCACCG 5871989 Query 281783 TATGCAA-CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 281841 || |||| |||| || ||||| || | | | ||| |||| ||| |||||||| | Sbjct 5871988 TAAGCAAACAGCCTCGTCAGGGTTGATGCTCTTATTCAGTTCTTTCCCATTGAAGTCCTG 5871929 Query 281842 TGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 | ||||||| ||| | ||| || || | | ||| || || || | ||| | |||| Sbjct 5871928 T---AGAAGTT-TCTGAATCTTGGGGATGTGGGTTGAACCACCCACCAGGACAGTATCAT 5871873 Query 281901 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960 | | ||| || || || || || | |||| | |||| || || || || || Sbjct 5871872 GGATCTGAGACTTGTCTAGCTTGGCATCCTGAAGGGCTTTCTCCACAGGGTCCAGTGTGT 5871813 Query 281961 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 282020 | | |||| ||| | | |||||||| ||| || | |||| | | || | | Sbjct 5871812 CACGGAACAGGTCAGCATTCAGTTCTTCAAATCGGGCACGGGTAATTGAGGTATAGAAGT 5871753 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC---GAAGAAGATAGTG 282077 | |||||||| | | |||||| ||| | | | || || ||||| || |||| Sbjct 5871752 CGATTCCTTCATAGAGGGAATCAGTCTCAGTACTGGCCTGGGTGCTGGAAGA-GAGAGTG 5871694 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGATTGA 282133 ||| | |||||| ||||| || || || | || | || || | || | || Sbjct 5871693 CACCT--AGCACGCTCACAAGCAGTATGAAGGCGACGGACAGCCCTCTTGTTCTCACTGG 5871636 Query 282134 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGAT 282191 | || | || | || |||||| ||| ||| | | ||| | || | || | Sbjct 5871635 TG----TCCTTCTTGTGCTTGTGCTTGAACTCTGCAATAAA--ATGGTTGACCATTCGGT 5871582 Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 | ||||| || || || || || | |||| | |||| | | || | || | || Sbjct 5871581 TGTCAAAGTCCTCTCCACCTAAGTGGGTATCT------GTAGATTTGACCTCAAAGATTC 5871528 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 |||| |||| || | | | |||||| || |||||||| | |||||| || || | Sbjct 5871527 CATCCTCAATAGTGAGAGTTGACACATCAAACGTGCCACCACCTAAATCAAAGATCAGCA 5871468 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 |||| ||||| | |||| || | ||||| |||| ||||||||||||||| | Sbjct 5871467 CATTTCTTTCTGCTCCGACCTTTTCGTCTAAGCCATAGGCAACAGCAGCAGCAGTTGGCT 5871408 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT---GGCTT 282428 | | | |||| | ||||| || |||||||| |||| |||||||| || || | Sbjct 5871407 CGT---TGATTCGAAGTACATTGAGCCCAGCAATAGTTCCAGCATCTTTGGTCTCAGCCT 5871351 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 | | || ||||| ||||| || || || || || | | | |||| || || || | Sbjct 5871350 GACGCTGAGAATCATTAAAGTAAGCGGGTACTGTGACAGCAGCATGGGTAACAGTCTTCC 5871291 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 || | || |||| ||| ||||| || | |||| ||| ||||| | | |||| Sbjct 5871290 CAGGGTGGGCTTCTGCTATTTCCTTCATCTTTGTCAAAACCATGGATGACACCTCCTCTG 5871231 Query 282549 G--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606 | |||| || || | || | ||| |||| || | || | | || | Sbjct 5871230 GATAGAAACTTTCT--GTCTCTCCCTTGTATTCTACTCGAACCTTAGGCCTGCTTGCATC 5871173 Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTG---AACACTTTGGTCATTAAA 282663 ||| | || | || ||||| | |||||||| || || |||| | ||| | Sbjct 5871172 ATTCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGGACAACAGCATCGTC----AG 5871117 Query 282664 ATC-TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722 || || || | | | ||| |||||| ||| || ||||| ||||| | |||| ||| Sbjct 5871116 GTCTTCGTGCAGTGAGGCATTTGGCATCAGAAACCGTGTTGGTGGGATTCATTGCAACTT 5871057 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782 | | || || || || || |||| ||| || || ||||| | |||| ||| | Sbjct 5871056 GGTTCTTTGCAGCGTCACCGATCAATCGTTTGGTATCAGTAAAGGCGGCATAGCTTGGGG 5870997 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 | || || || || |||||||| ||||| ||||| ||||| |||| || | ||||| | Sbjct 5870996 TAGTTCGGTTCCCCTGATCATTGGCAATTATTTCCACTTTTCCATGCTGGAAGACACCCA 5870937 Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 ||||| | | || || || | |||||| |||| Sbjct 5870936 CACAAGAATAGGTGGTGCCAAGATCAATGCCAA 5870904 >seq1852 Length=2857453 Score = 167 bits (184), Expect = 2e-35 Identities = 341/504 (68%), Gaps = 2/504 (0%) Strand=Plus/Minus Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| |||| ||||||||||||||| || || || ||||| | ||||| || ||||||| Sbjct 1013301 CATAGGCAACAGCAGCAGCAGTTGGCTCGTTGATGATTCTAAGTACATTGAGCCCAGCAA 1013242 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | |||| |||||||| || || || || || || ||||| || ||||| || || | Sbjct 1013241 TAGTTCCAGCATCTTTGGTAGCCTGATGCTGAGAGTCATTAAAGTAAGCAGGTACTGTGA 1013182 Query 282465 TAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTA 282524 ||| |||| || || || |||| || || |||| ||| ||||| || | | Sbjct 1013181 CAACAGCATTGGTAACAGTCTTCCCAAGGTAGGCTTCTGCTATTTCCTTCATCTTTGTCA 1013122 Query 282525 AAATCATTGATGAAATTTGTTCTGGAGA-ATATTGCTTGGATTCATTTTGATATGATACT 282583 ||| ||| ||||| | | |||||| | | | | ||| | ||| ||| |||| Sbjct 1013121 AAACCATGGATGACACCTCCTCTGGATAGAAACTTTTTGTCTCTCCCTTG-TATTCTACT 1013063 Query 282584 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGAT 282643 | || | || | || |||| | || | || ||||||| |||||||| || Sbjct 1013062 TGAATCTCAGGCCTGCCTGCATCATTCACCACCATGAAGGGCCAATGCTTCATATCAGAC 1013003 Query 282644 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 282703 || ||| |||| ||| || ||||| | |||| |||||||||| || ||| Sbjct 1013002 TGGACAACAGCATCATCAAATCTTCATCCAATGAGGTGTTTGGCATCAAAAACCGTGTTG 1012943 Query 282704 GTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTA 282763 || ||||| | | || |||| | || || ||||| || |||| ||||| || || ||| Sbjct 1012942 GTGGGATTCATTACAACTTGGTTCTTTGCAGCATCACCGATCAATTGTTCGGTATCAGTA 1012883 Query 282764 AATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA 282823 || | ||||| ||| || || | || || |||||||| ||||| ||||| || || Sbjct 1012882 AAGGCGACATAGCTTGGGGTAGTTTGGTTCCCCTGATCATTGGCAATTATTTCCACCTTT 1012823 Query 282824 CCATTTTGCCATACACCTACACAA 282847 | | || | ||||| |||||| Sbjct 1012822 CTGTACTGGAAGACACCCACACAA 1012799 >seq1964 Length=2859116 Score = 109 bits (120), Expect = 4e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || || ||||||||||||| ||||||||||| || ||| | || |||||| | Sbjct 2017991 TGTACACTTATCCTGACAGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 2017932 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | || || |||||||| |||||||||||||| | |||||| | Sbjct 2017931 GTGGTTGGGAGAGACAAGTACGGGGTTTTCCCTCTTAGAGGAAAACTGCTTAATGTTCGA 2017872 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 2017871 GAAGCTTCTCATAAA 2017857 >seq9554 Length=8605134 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||||||||| ||||| ||||| || | || Sbjct 7946690 TTTTTGTCTAAGCCATAGGCAATAGCAGCAGCAGTTGGCTCATTGATAATCCTAAGTACG 7946749 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||||||| |||| |||||||| || || || | || ||||| ||||| || Sbjct 7946750 TTGAGCCCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAATCATTAAAGTAA 7946809 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | ||| |||| Sbjct 7946810 GCGGGTACTGTGACAACAGCAT 7946831 >seq1563 Length=23207421 Score = 95.1 bits (104), Expect = 9e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 |||| |||| || ||||| ||||| ||||| ||||||||| | || || | || || Sbjct 22844337 TGTAATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCCAAGTCAT 22844396 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 ||||||||| ||||| ||| | || ||| ||||| || || |||||||| || || || Sbjct 22844397 TCATTACGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAGATTGGTAGGGCTGGCCG 22844456 Query 131296 TGATGGA 131302 ||||||| Sbjct 22844457 TGATGGA 22844463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740101343939376