Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20acutorostrata_20scammoni_20[refseq_20GCF_5F000493695.
1_202013-10-31] 10,776 sequences; 2,431,687,698 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1564 156 8e-33
seq3672 150 4e-31
seq8555 147 4e-30
seq4888 145 1e-29
seq920 141 2e-28
seq7443 140 6e-28
seq2575 140 6e-28
seq4777 136 8e-27
seq2230 132 9e-26
seq4225 131 3e-25
seq2941 131 3e-25
seq5888 125 1e-23
seq975 107 4e-18
seq3006 98.7 2e-15
seq1031 96.9 7e-15
seq1 91.5 3e-13
>seq1564
Length=3672159
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| ||| || || | |||||| || || |||||||| || || |||||||
Sbjct 1054188 TACCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAG 1054247
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || ||||| || ||||| || |||||||| || || || || || || |
Sbjct 1054248 AAAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATGAGCCTCTGCTGGTCAGGGG 1054307
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || || || || || || ||| | || || |
Sbjct 1054308 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCA 1054367
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 1054368 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1054416
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| ||| ||||| | |||||| || || || ||||| || || |||||||
Sbjct 1054416 TACCACCCCTCAGACGGAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAG 1054475
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || ||||| || ||||| || |||||||| || || || || || || |
Sbjct 1054476 AAAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATGAGCCTCTGCTGGTCAGGGG 1054535
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || || || || || || ||| | || || |
Sbjct 1054536 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCA 1054595
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 1054596 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1054644
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| ||| || || | |||||| || || || ||||| || || |||||||
Sbjct 1054644 TACCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAG 1054703
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || ||||| || ||||| || |||||||| || || || || || || |
Sbjct 1054704 AAAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATGAGCCTCTGCTGGTCAGGGG 1054763
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || || || || || || ||| | || || |
Sbjct 1054764 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCA 1054823
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||| ||||| ||||| || || ||||||||
Sbjct 1054824 CCTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1054872
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||| || || | |||||| || || |||||||| || || ||||||||
Sbjct 1053962 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 1054021
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || ||||| || ||||| || |||||||| || || || || || || ||
Sbjct 1054022 AGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 1054081
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| || ||||| || || || || || || || ||| | || || ||
Sbjct 1054082 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 1054141
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 1054142 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1054188
>seq3672
Length=15443579
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| | || || || || || || ||||| | | | | || ||||| |||||
Sbjct 13644543 TGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 13644484
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|||||||||||||| |||||||| || || ||||| ||||||||||| || || |||||
Sbjct 13644483 TTTCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 13644424
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||| ||||| || ||||| ||||| || || | ||| || ||||| ||||||
Sbjct 13644423 GCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCTGTC 13644364
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 13644363 AGGGTCTTCACGAAAATCTGCAT 13644341
>seq8555
Length=10321147
Score = 147 bits (162), Expect = 4e-30
Identities = 152/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | | || |||||||||||
Sbjct 2780830 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCTAGTTGC 2780889
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
||||| |||||||| |||||||| || || ||||| ||||||||||| || || |||||
Sbjct 2780890 TTTCCGGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 2780949
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || || | ||| || ||||| || |||
Sbjct 2780950 GCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTC 2781009
Query 82788 AACGTCTTTACAAATATCT 82806
| ||||| || || ||||
Sbjct 2781010 ACGGTCTTCACGAAAATCT 2781028
>seq4888
Length=12843668
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || | || | ||||| | | | | |||||||| |||||
Sbjct 850534 TGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTACGTCCGTCTTCCAGTTGC 850475
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| || || ||||| |||||||||||||| || |||||
Sbjct 850474 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCGTGGATCTTG 850415
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| | ||||| ||||| || || | ||| || ||||| || |||
Sbjct 850414 GCGTTTACATTTTCTGTTGTATCCAAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTC 850355
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 850354 AGGGTCTTCACGAAAATCTGCAT 850332
>seq920
Length=9572204
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | | || ||||| |||||
Sbjct 2426421 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 2426480
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || |||||||| |||||||| || || ||||| ||||||||||| || || |||||
Sbjct 2426481 TTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 2426540
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || | ||| ||||| || || | ||| || ||||| || |||
Sbjct 2426541 GCCTTTACATTTTCTATTGCATCTGAGGGTTCGACCTCAAGAGTGATGGTCTTCCCCGTC 2426600
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 2426601 AGGGTCTTCACGAAAATCTGCAT 2426623
>seq7443
Length=30544692
Score = 140 bits (154), Expect = 6e-28
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || || | ||| || || | |||||| ||||| |||||||| || || ||||||||
Sbjct 5029166 CCACCCCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAA 5029107
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | | |||||||| || ||||| || |||||||| || || || || || || ||
Sbjct 5029106 ATAGTGCGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 5029047
Query 82704 --ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
|| ||||||||||| || ||||| || || ||||| | || || ||| | || || |
Sbjct 5029046 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCA 5028987
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||| |||| ||||| | || ||||||||
Sbjct 5028986 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 5028938
>seq2575
Length=1273154
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||| || || | ||||| || || |||||||| || || ||||||||
Sbjct 238766 CCACCCCTCAGACGGAGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAA 238707
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || ||||| || ||||| || |||||||| | || || | || || ||
Sbjct 238706 AGAGTGCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAACCTCTGCTAGTCAGGGGGG 238647
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| || ||||| || || ||||| || || || ||| | | || ||
Sbjct 238646 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACC 238587
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 238586 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 238540
>seq4777
Length=16179633
Score = 136 bits (150), Expect = 8e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||| || || || || | || || ||||| | ||| | || ||||| |||||
Sbjct 14702109 TGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGTCCATCTTCCAGTTGC 14702050
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || |||||||| |||||||| || || ||||| ||||||||||| || || |||||
Sbjct 14702049 TTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 14701990
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || | ||| ||||| || || | ||| || ||||| || |||
Sbjct 14701989 GCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTGATGGTCTTCCCCGTC 14701930
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 14701929 AGGGTCTTCACGAAAATCTGCAT 14701907
>seq2230
Length=20112346
Score = 132 bits (146), Expect = 9e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || | || || ||||| | | | | || ||||| |||||
Sbjct 5902831 TGAAGAGTGGACTCCTTTTGACTGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 5902772
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||||||| || | |||||| || | | ||| ||| ||||||||||||| |||||
Sbjct 5902771 TTGCCAGCAAAAATCAATCTTTGCTGGTTAGAAGGAATTACTTCCTTATCTTGGATCTTG 5902712
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| | ||||| ||||| || || | ||| || ||||| ||||||
Sbjct 5902711 GCGTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCTGTC 5902652
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| |||| ||||| ||||||||
Sbjct 5902651 AGGATCTTCACAAAAATCTGCAT 5902629
>seq4225
Length=13699901
Score = 131 bits (144), Expect = 3e-25
Identities = 150/198 (76%), Gaps = 3/198 (2%)
Strand=Plus/Minus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA-CCGTCTTCTAGTTGTTTTCC 82672
|| || || || || || || || |||||| ||| | | || || || ||||| || ||
Sbjct 3551517 GTGGACTCCTTTTGAATGTTGTAGTCAGAT-GAAGTATGGCCATCCTCCAGTTGCTTGCC 3551459
Query 82673 AGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTT 82732
||||||||| |||||||| || | ||||| |||||||| ||||| || ||||| || ||
Sbjct 3551458 AGCAAAGATCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCTT 3551399
Query 82733 TACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792
||||||||| || ||||| |||||| || | | ||| || ||||| ||||||| ||
Sbjct 3551398 TACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTCAGGGT 3551340
Query 82793 CTTTACAAATATCTGCAT 82810
||| | || ||||||||
Sbjct 3551339 CTTCATGAAAATCTGCAT 3551322
Score = 104 bits (114), Expect = 5e-17
Identities = 99/126 (79%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| |||| ||||| | |||||||||| |||||||| ||||| ||||| ||||||| |
Sbjct 2854213 CCATCTTGCAGTTGCTAGCCAGCAAAGA--AGTCTTTGCTGATCAGGAGGAATTCCTTTC 2854156
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
||||| || ||||| || ||||||||||| || ||||| ||||| || |||| |||
Sbjct 2854155 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCCAGGGTTCAACCTCCAGAGTG 2854096
Query 82773 ATCGTC 82778
|| |||
Sbjct 2854095 ATGGTC 2854090
>seq2941
Length=1025224
Score = 131 bits (144), Expect = 3e-25
Identities = 151/202 (75%), Gaps = 1/202 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | | || ||||| |||||
Sbjct 785922 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 785863
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| || || || | ||||||||||| || || |||||
Sbjct 785862 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCCTTGTCCTGGATCTTG 785803
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || | | ||| || ||||| ||||||
Sbjct 785802 GCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTC 785744
Query 82788 AACGTCTTTACAAATATCTGCA 82809
| ||||| | || |||||||
Sbjct 785743 AGGGTCTTCATGAAAATCTGCA 785722
>seq5888
Length=21378709
Score = 125 bits (138), Expect = 1e-23
Identities = 151/204 (74%), Gaps = 1/204 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||||| || || || || || || ||||| | | | | || ||||| |||||
Sbjct 13335886 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 13335945
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| ||| |||| || || ||||| ||||||||||| || || ||||
Sbjct 13335946 TTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGCTCTTG 13336005
Query 82728 GCTTTTACA-TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| |||||| ||||| || | ||| ||||| || || | ||| || | | | |||||
Sbjct 13336006 GCCTTTACATTTTTCTATTGCATCCGAGGGTTCAACCTCGAGAGTGATGGCCATCCCTGT 13336065
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
|| ||||| | || ||||||||
Sbjct 13336066 CAGGGTCTTCAAGAAAATCTGCAT 13336089
>seq975
Length=6303504
Score = 107 bits (118), Expect = 4e-18
Identities = 120/158 (76%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| ||||| || ||||||||||| |||||||| || || ||||| |||||||||
Sbjct 4298489 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 4298548
Query 82713 TTATCTTGAATCTTTGCTTTTACA-TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT 82771
||||| || ||||| | |||||| ||||| | ||||| ||||| ||||| | |||
Sbjct 4298549 TTATCCTGGATCTTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGT 4298608
Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809
|| ||| | || || ||||| | || |||||||
Sbjct 4298609 GATGGTCAT-CCCCAGAAGGTCTTCATGAAAATCTGCA 4298645
>seq3006
Length=36069362
Score = 98.7 bits (108), Expect = 2e-15
Identities = 118/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| || || || || |||||||| || || || || || ||||| || ||||||
Sbjct 18713459 CCATCTTCCAGATGCTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAGG-ATGCCTTCC 18713401
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
||||| || ||||| || || ||||| || | ||| | || ||||| |||| ||
Sbjct 18713400 TTATCCTGGATCTTGGCCTTCACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTG 18713341
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|| ||||||| ||||| ||||| || || || ||||||
Sbjct 18713340 ATGGTCTTGCTGGTCAAGGTCTTCACGAAGATTTGCATT 18713302
>seq1031
Length=6122215
Score = 96.9 bits (106), Expect = 7e-15
Identities = 122/168 (73%), Gaps = 5/168 (3%)
Strand=Plus/Plus
Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214
|||||||||| ||| |||||||| || || || || || || |||||||| || || |||
Sbjct 2319636 TGGTGGTACTTTATTTCTAAAGGCATTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 2319695
Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274
|| ||| || || || || | |||||||||||||| | ||| |||||||| ||
Sbjct 2319696 AAGAAGAACAACCAAGTCTCCTTCCTTCACGTATATCATCACTGTACAATGTTTACATTG 2319755
Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGG-----AGGTCAAGCATTTT 60317
| ||| | || ||||| ||| | || || ||| |||||||||
Sbjct 2319756 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAGGGTAAGCATTTT 2319803
>seq1
Length=51448160
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| | || ||||||||||| |||||||| || || ||| | || |
Sbjct 642823 AGCACCAAGTGTATGGTGGATTCTTTCTGGATATTATAGTCTGAGAGAGTATGGCCACCC 642882
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || ||||| | ||||| || || || ||||| | ||| | || | || | |||
Sbjct 642883 TC-AGCTGTTTGTCTGCAAAAATCAGACTGTGTTGGTGTGGCAGGATGTCCTCAGTGTCT 642941
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
| || || ||||| ||||| ||||| || || | | | || || | ||| || |||
Sbjct 642942 TTGATTTTGGCTTTGACATTCTCAATGGTGACACTGAGCTTGACCTCAAGAGTGATGGTC 643001
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||| ||||| ||||| ||||||||
Sbjct 643002 TTGCCCATCAGGGTCTTCACAAAGATCTGCAT 643033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981691641573064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |