Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20acutorostrata_20scammoni_20[refseq_20GCF_5F000493695. 1_202013-10-31] 10,776 sequences; 2,431,687,698 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq4113 226 2e-54 seq1674 206 2e-48 seq4114 203 3e-47 seq2563 201 9e-47 seq1064 183 3e-41 seq7110 127 2e-24 seq780 120 3e-22 seq2230 96.9 3e-15 seq1663 93.3 3e-14 >seq4113 Length=38937830 Score = 226 bits (250), Expect = 2e-54 Identities = 388/556 (70%), Gaps = 9/556 (2%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || ||||||||||| || || || | ||||| Sbjct 13965793 CTAAACTGCATCGTTGCTGTGTCCCAGAACATGGGCATTGGCAAGAACGGGGACCTGCCC 13965734 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256 ||||| || || | ||||||| | |||| |||| |||||| | | ||||| Sbjct 13965733 TGGCCCCCGCTCAGGAATGAATACAGGTATTTCCAAAGAATGACCACAACCTCTTCAGTA 13965674 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| || |||||||| || || |||||||| || |||| || Sbjct 13965673 GAAGGTAAACAGAATTCGGTGATTATGGGTAGGAAAACATGGTTCTCCATTCCAGAGAAG 13965614 Query 2317 AGCAGGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCA 2376 | | ||||| || ||||||| ||| | |||||||||||| | || || || || ||| Sbjct 13965613 AATCGACCTTTAAAGGACAGAATTAATATAGTTCTCAGTAGAGAACTCAAGGAACCTCCA 13965554 Query 2377 CGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGG--AC 2434 | || ||||| ||| |||| | |||| | ||| | || || ||| | || | | || Sbjct 13965553 CAGGGAGCTCATTTTCTTGCCAGAAGTCTGGATGAAGC-CTTAAAACT-TACTGAGCAAC 13965496 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 ||||||||| | | | ||||| | | | |||||| | || || || ||||| ||| ||| Sbjct 13965495 CAGAATTAACAAATAAAGTGGACATGGTCTGGATAGTGGGAGGCAGTTCTGTTTATAAGG 13965436 Query 2495 AGAGCATTA-CAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 | ||| | |||| | || | | | || ||| | |||||||| |||| ||||| Sbjct 13965435 AAGCCATGAACAAGC-CAGGCCATCTCAGACTATTTGTGACAAGGATCATGCAGGAATTT 13965377 Query 2554 GAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTT 2613 ||| |||| |||| || ||||||||| || | ||||| |||| | | |||| | Sbjct 13965376 GAAAGTGACACATTTTTTCCAGAAATTGATTTGGAAAAATATAAACTTATCCCAGAATAT 13965317 Query 2614 CCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATAT 2673 ||||| ||||| |||| || || || || || || |||| ||||||||||| ||||| Sbjct 13965316 CCAGGCGTTCCTTCTGATGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATAT 13965257 Query 2674 GaaaaaaaaaCATAAT 2689 ||||| || | |||| Sbjct 13965256 GAAAAGAACAATTAAT 13965241 Score = 203 bits (224), Expect = 3e-47 Identities = 361/523 (69%), Gaps = 9/523 (2%) Strand=Plus/Minus Query 2167 AATATGGGCATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAA 2226 || ||||||||||| || || | | ||||| ||||| | || | ||||||| | Sbjct 25459336 AACATGGGCATTGGCAAGAACAGGGACCTGCCCTGGCCCCTGCTCAGGAATGAATACAGG 25459277 Query 2227 CATTTTCAAAAAATGAC---ATCTTCTTCCACTGACTTAAAACAGAATGTTGTAATTATG 2283 |||| |||| |||||| | | ||||| | || ||||||||| | || |||||| Sbjct 25459276 TATTTCCAAAGAATGACCACAACCTCTTCAGCAGAAGGTAAACAGAATTTGGTGATTATG 25459217 Query 2284 GGAAGAAAGACATGGTTTTCACTTC---CCATTAAAAGCA--GGCCTTTGAACAACAGAA 2338 || || || || ||||| || ||| ||| | ||| | | ||||| | |||||| Sbjct 25459216 GGTAGGAAAACCTGGTTCTCCATTCATTCCAG-AGAAGAATCGACCTTTAAGGGACAGAA 25459158 Query 2339 TAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAA 2398 | ||| | ||||||| |||| | || || || || |||| || |||| ||| |||| | Sbjct 25459157 TTAATATAGTTCTCATTAGAGAACTCAAGGAACCTCCACAGGGAGCTCCTTTTCTTGCCA 25459098 Query 2399 AAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACAGGGTGGATA 2458 ||||| | ||| | || | || |||| || |||||||| | | || ||||| | Sbjct 25459097 AAAGTCTGGATGATGCATTAAAACTTATTGAGCAACGAGAATTAACAAATAGAGTGGACA 25459038 Query 2459 AGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCTTGCAAAC 2518 | |||||||| | | || || ||||| ||| |||| ||| | | | | || | | Sbjct 25459037 TGGTTTGGATAGTGGCAGGCAGTTCTGTTTATAAGGAAGCCATGAACAAACCAGGCCATC 25458978 Query 2519 AGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAGAAA 2578 | || ||| | |||||||| ||||| |||||||| |||| |||| || ||||||| Sbjct 25458977 TTAGACTATTTGTGACAAGGATCATGCAAGAATTTGAAAGTGACACATTTTTTCCAGAAA 25458918 Query 2579 TTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAG 2638 ||||| | ||||| |||| | | |||| ||||||||||| |||| || || | Sbjct 25458917 TTAATTTGGAAAAATATAAACTTATCCCAGAATATCCAGGTGTTCTTTCTGATGTCCAGG 25458858 Query 2639 AAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 | || || || |||| ||||||||||| || ||||||| || Sbjct 25458857 AGGAGAAAGGCATTAAGTACAAATTTGAAGTACATGAAAAGAA 25458815 >seq1674 Length=23033003 Score = 206 bits (228), Expect = 2e-48 Identities = 380/554 (69%), Gaps = 5/554 (1%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| |||| ||||| || | || | |||||| || || || || | || || Sbjct 12865104 CTAAACTGCATTGATGCTGTGTCCCAGAACACGGGCATAGGCAAGAACGGGGACCTACCC 12865045 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256 ||||| | || | | |||| | |||| |||| |||||| | | ||||| Sbjct 12865044 TGGCCCCGGCTCAGGAGAGAATACAGGTATTTCCAAAGAATGACTACAACCTCTTCAGTA 12864985 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAA- 2315 || ||||||||| | || || ||||| || || || ||||| || |||| || Sbjct 12864984 GAAGGTAAACAGAATTTGGTGATCATGGGCAGGAAAACCTGGTTCTCCGTTCCAGAGAAG 12864925 Query 2316 AAGCAGGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACC 2375 || || | ||| || ||||||| ||| | |||||||||||| | || || || || || Sbjct 12864924 AATCAAAC-TTTAAAGGACAGAATTAATATAGTTCTCAGTAGAGAACTCAAGGAACCTCC 12864866 Query 2376 ACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACC 2435 || || ||||| ||| |||| | |||| | ||| | || | || |||| ||| Sbjct 12864865 ACAGGGAGCTCATTTTCTTGCCACAAGTCTGGATGATGCCTTAAAACTTATTGAGCAACC 12864806 Query 2436 AGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGA 2495 |||||||| | | | ||||| | | |||||||| | || || || ||||| ||| ||| Sbjct 12864805 AGAATTAACAAATAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCTGTTTATACGGA 12864746 Query 2496 GAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGA 2555 ||| | || | || | | | || ||| | |||||||| |||| |||||| Sbjct 12864745 AGCCATGAGCAGGCCAGGCCATCTTAGACTATTTGTGACAAGGATCATGCAGGGATTTGA 12864686 Query 2556 ATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCC 2615 | |||| |||| || ||||||||| || | |||||||||| || | |||| ||| Sbjct 12864685 AAGTGACACATTTTTTCCAGAAATTGATTTGGAAAAATACAAACTTCTCCCAGAATATCC 12864626 Query 2616 AGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGa 2675 ||||||||| |||| || || || || || || |||| ||||||||||| ||||||| Sbjct 12864625 AGGTGTTCCTTCTGATGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGA 12864566 Query 2676 aaaaaaaaCATAAT 2689 ||| || | |||| Sbjct 12864565 AAAGAACAATTAAT 12864552 >seq4114 Length=13981371 Score = 203 bits (224), Expect = 3e-47 Identities = 370/531 (70%), Gaps = 13/531 (2%) Strand=Plus/Minus Query 2167 AATATGGGCATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAA 2226 || |||||||| || || || || | ||||| ||||| || || | ||||||| | Sbjct 6489027 AACATGGGCATCGGCAAGAATGGGGACCTGCCCTGGCCCCCGCTCAGGAATGAATACAGG 6488968 Query 2227 CATTTTCAAAAAATGAC---ATCTTCTTCCACTGACTTAAAACAGAATGTTGTAATTATG 2283 |||| |||| |||||| | | ||||| || ||||||||| | || |||||| Sbjct 6488967 TATTTCCAAAGAATGACCACAACCTCTTCAGTAGAAGGTAAACAGAATTTGGTGATTATG 6488908 Query 2284 GGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCA--GGCCTTTGAACAACAGAATAA 2341 || || ||||| || || || ||| ||| | ||| | | ||||| || |||||||| | Sbjct 6488907 GGTAGGAAGACCTGCTTCTC-CTTTCCAG-AGAAGAATCGACCTTTAAAGAACAGAATTA 6488850 Query 2342 ATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAAAAA 2401 || | |||||||||||| | || || || || |||| || | || ||| |||| |||| Sbjct 6488849 ATATAGTTCTCAGTAGAGAACTCAAGGAACCTCCACAGGGAGTGCATTTTCTTGCCAAAA 6488790 Query 2402 GTATAGATCACGCTCTGGAAATTATAATAGG--ACCAGAATTAAAAGACAGGGTGGATAA 2459 || | ||| | || || ||||| || | | ||||||||||| | | | ||||| | Sbjct 6488789 GTCTGGATGATGC-CTTAAAATT-TACTGAGCAACCAGAATTAACAAATAAAGTGGACAT 6488732 Query 2460 GATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTA-CAAGATCTTGCAAAC 2518 | |||||||| | || || || ||||| || |||| || | |||| | || | | Sbjct 6488731 GGTTTGGATAGTGGGAGGCAGTTCTGTTTACAAGGAAGCCAGGAACAAGC-CAGGCCATC 6488673 Query 2519 AGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAGAAA 2578 | || ||| | |||||||| |||| |||||||| |||| ||| || ||||||| Sbjct 6488672 TTAGTCTATTTGTGACAAGGATCATGCAGGAATTTGAAGGTGACACAATTTTTCCAGAAA 6488613 Query 2579 TTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAG 2638 || || | |||| |||| || | |||| |||| | ||||| |||| || || | Sbjct 6488612 TTGATTTGGAAAAATGTAAACTCCTCCCAGAATATCCAAGGGTTCCTTCTGATGTCCAGG 6488553 Query 2639 AAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaaaaCATAAT 2689 | || || || |||| ||||||||||| |||||||||| || | |||| Sbjct 6488552 AGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGAAAAGAACAATTAAT 6488502 >seq2563 Length=19862793 Score = 201 bits (222), Expect = 9e-47 Identities = 198/256 (77%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1275 CCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATG 1334 || || |||||| | ||||| |||||||||||| | || || |||||||||||||||| Sbjct 17363397 CCCCAGGAAGTTCTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCAGAAAACATG 17363338 Query 1335 GCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAAC 1394 ||| ||||| | |||| |||||||| || ||||| || || || || || || ||| Sbjct 17363337 ATCACCTTTAGCCAGAACCATGGGGTTGTGGTCCAGCCTGCCTATAAGGACAAGATAAAC 17363278 Query 1395 ATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGAT 1454 || || |||| ||||| ||| |||| || ||||||||||| || || ||||| ||| Sbjct 17363277 ATCACCCAGCTGGGACTCATCAACTCAACCATTACCTTCTGGAATACCACCTTGGAAGAT 17363218 Query 1455 GAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGG 1514 |||||||| |||||||| | || || || ||||| ||||||||||| |||||||||| Sbjct 17363217 GAAGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGAATAGCC 17363158 Query 1515 TGTCTAACCCTTTTTG 1530 || || || || |||| Sbjct 17363157 TGCCTCACTCTCTTTG 17363142 >seq1064 Length=6047857 Score = 183 bits (202), Expect = 3e-41 Identities = 352/518 (68%), Gaps = 6/518 (1%) Strand=Plus/Plus Query 2175 CATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCA 2234 ||||| || || || | ||||| ||||| || || | ||||||| | |||| || Sbjct 2122395 CATTGTCAAGAACGGGGACCTGCCCTGGCCCCCGCTCAGGAATGAATACAGGTATTTCCA 2122454 Query 2235 AAAAATGAC---ATCTTCTTCCACTGACTTAAAACAGAATGTTGTAATTATGGGAAGAAA 2291 || |||||| | ||||||| | || ||||||||| | || |||||||| || || Sbjct 2122455 AAGAATGACCACAACTTCTTCAGCAGAAGGTAAACAGAATTTGGTGATTATGGGTAGGAA 2122514 Query 2292 GACATGGTTTTCACTTCCCATTAAAAGCAGGCCTTTGAACAACAGAATAAATCTGGTTCT 2351 ||| ||||| || |||| || | | |||| || ||||||| ||| | ||||| Sbjct 2122515 GACCTGGTTCTCCATTCCAGAGAAGAATCGATCTTTAAAGGACAGAATTAATATAGTTCT 2122574 Query 2352 CAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCA 2411 ||||||| | || || || || |||| || ||||| ||| |||| |||||| | ||| | Sbjct 2122575 CAGTAGAGAACTCAAGGAACCTCCACAGGGAGCTCATTTTCTTGCCAAAAGTCTGGATGA 2122634 Query 2412 CGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAAT 2471 || | || |||| ||||||||||| | | | ||||| | | | |||||| | Sbjct 2122635 TGCCTTAAAACTTATTGAGCAACCAGAATTAACATATAAAGTGGACATGGTCTGGATAGT 2122694 Query 2472 TGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTT 2531 || || || || || |||| ||| | || | || | | || ||| | Sbjct 2122695 GGGACACAGTTCCGTTTACAAGGAAGCCATGAACAGGCCAGGCCATCTTCGACTATTTGT 2122754 Query 2532 AACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAA 2591 |||||||| |||| |||||||| ||| |||| || ||||||| | || | || Sbjct 2122755 GACAAGGATCATGCAGGAATTTGAAAATGACACATTTTTTCCAGAAACTGATTTGGAAAA 2122814 Query 2592 ATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAAT 2651 ||| |||| || | |||| |||||||||||| |||| || || || || || || || Sbjct 2122815 ATATAAACTTCTCCCAGAATATCCAGGTGTTCCTTCTGATGTCCAGGAGGAGAAAGGCAT 2122874 Query 2652 TAGATACAAATTTGAGATATATGaaaaaaaaaCATAAT 2689 || |||| |||||| ||||||||| || | |||| Sbjct 2122875 TAAGTACAGATTTGA---ATATGAAAAGAACAGTTAAT 2122909 >seq7110 Length=16720443 Score = 127 bits (140), Expect = 2e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | |||||||| ||||||||| | ||||| || ||||||||| Sbjct 8224581 GTGGTGGAGGAGCTCTTCAGGGATGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 8224522 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || || |||| || |||||| Sbjct 8224521 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCCCCCCTGGTGGACAAC 8224462 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| ||||||||| || Sbjct 8224461 ATCGCCCTGTGGATGACTGA 8224442 >seq780 Length=6765806 Score = 120 bits (132), Expect = 3e-22 Identities = 398/612 (65%), Gaps = 13/612 (2%) Strand=Plus/Minus Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515 || || | |||||| |||||||||||||||| || | || ||||| || | || ||| Sbjct 32458 AGCTGAATTTTCAGCGGCTCAATGTGATTCAGGTAAATGTGTGCATCTCCCAAAGTGTGT 32399 Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAG 118575 | || ||||| || | || || || | ||| || ||||||| | || |||| Sbjct 32398 ACAAAGTCACCTGGCTTCAGGCCCGTGACGTGTGCGATCATGT-----AGCAGGGCGTAG 32344 Query 118576 CTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAA 118635 ||||| | || || || |||||||| ||||||||| |||| ||||||||| ||||| Sbjct 32343 CTGGCGATGTTGAAGGGCACACCCAGGCCCATGTCTCCTGACATCTGGTACAGCTGGCAG 32284 Query 118636 GAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATG 118695 || ||||| || || | || || ||||| | | | ||| || || || || ||||| Sbjct 32283 GACAGCTCACCATTCACCACGTAGAACTGGCAAAGGGCGTGGCACGGGGGTAGGGCCATG 32224 Query 118696 GAACTCAGTTGGGCAGGATTCCAGGCTGTTAAAACATG--CCTTCTG-CTATATGGTTCT 118752 | || | |||||||| || | | ||| |||||| | | |||| Sbjct 32223 AGAGGGAGATCTTTTGGATTCCAAGC--ACACAGGATGATTCTTCTGTCGTCAGGGTTGG 32166 Query 118753 ACCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACTGAGAC 118812 || || ||| | | || || | ||||| || || | | | ||| | || Sbjct 32165 TTTTG-ATTGTGTCAGTCACTTTTTGCAGTTGATCTACTCCTTGATCTGAATAATCTGAA 32107 Query 118813 TCGCAT-CCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAG 118871 || ||| |||| ||||| ||||||||| ||||| ||||| |||||||| || || | Sbjct 32106 TC-CATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAA 32048 Query 118872 ATCTCCCTGGGACCTAAAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCCATTAGC 118931 ||| || | | || || || | | | || ||| |||||||| || Sbjct 32047 ATCCCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGC 31988 Query 118932 ATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAA 118991 || ||| || ||||| || | ||| || |||| |||||| || || | | ||| Sbjct 31987 ATCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCCCTTGATAAA 31928 Query 118992 CCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051 ||| || | |||||| ||| || | || ||||| ||| ||||| | ||| ||||| Sbjct 31927 CCACAGCAACTCCTCCGAAACACCCTTGCAGAAAACACGTTTGGTTGTCAGCAGAGGAAA 31868 Query 119052 CTGACCTCTAAG 119063 | | |||| || Sbjct 31867 TTCATCTCTCAG 31856 >seq2230 Length=20112346 Score = 96.9 bits (106), Expect = 3e-15 Identities = 135/188 (72%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515 || || | |||||| |||||||||||| || || | || ||||| || | || ||| Sbjct 11223140 AGCTGCATTTTCAGCAGCTCAATGTGATCCAGGTAAATGTGTGCATCTCCCAAAGTGTGT 11223199 Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAG 118575 | | ||||| || | || ||||| | ||| || |||||||| || | || ||| Sbjct 11223200 ACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAG 11223259 Query 118576 CTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAA 118635 ||||| || || || | |||||||| ||| ||||| |||| |||||||||| | ||| Sbjct 11223260 CTGGCGACGTTGAAGGACACACCCAGGCCCCTGTCTCCTGACCTCTGGTACAGCT-GCAG 11223318 Query 118636 GAGAGCTC 118643 || ||||| Sbjct 11223319 GACAGCTC 11223326 >seq1663 Length=3291224 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCAGG 2322 |||||||| | || |||||||| | || || ||| | || |||| || | | Sbjct 1297989 AAACAGAACTTGGTGATTATGGGTGGGAAAACCTGGATCTCCATTCCAGAGAAGAATCGA 1298048 Query 2323 CCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGG 2382 ||||| || ||||||| ||| | |||||||||||| | || || || || |||| || Sbjct 1298049 CCTTTAAAGGACAGAATTAATATAGTTCTCAGTAGAGAACTCAAGGAACCTCCACAGGGA 1298108 Query 2383 GCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTA 2442 ||||| ||| |||| |||||| | ||| | || | || |||| ||||| |||| Sbjct 1298109 GCTCATTTTCTTGCTAAAAGTCTGGATGATGCCTTAAAACTTATTGAGCAACCAGCATTA 1298168 Query 2443 AAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGA 2495 | | | | ||||| | | |||||||| | || || || || || ||| |||| Sbjct 1298169 ACAAATAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCCGTTTAT-AGGA 1298220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414422365725664