Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 297 2e-75
seq404197 242 4e-59
seq418289 102 8e-17
>seq366024
Length=42324
Score = 297 bits (328), Expect = 2e-75
Identities = 590/866 (68%), Gaps = 12/866 (1%)
Strand=Plus/Minus
Query 16669 CATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATAT 16728
||| || || || |||| || | || || | |||||||| || || || || || ||
Sbjct 18348 CATCCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAAT 18289
Query 16729 ATTCTCCATGAAATCAAAAGGATTAG-TAG-CTGAAAATATTTTAGAGTACCCCAGTTCG 16786
||||||||| || ||||| ||||| || ||||||| || | | ||||| ||
Sbjct 18288 ATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAA--AACCCAGCTCC 18231
Query 16787 GCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCT 16846
|| | ||| || || || ||||| || || || ||| || ||| ||||| ||
Sbjct 18230 CGCATAAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAAAGTGCAATTCATCCCA 18171
Query 16847 ATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTA 16906
|| || || || || || ||||| | || || ||||| ||| || |
Sbjct 18170 ATGAGCTTCACTGGCAGGGCATCCGTGAGGAACTCCTGTTCTATTCTAACTGCATTGACG 18111
Query 16907 ATAAT--ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGAC 16964
|| || | | | |||| | ||| || ||| | ||| || ||||| || ||||| |
Sbjct 18110 ATTATTTATTTG--ACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAATATCAGGC 18053
Query 16965 ATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACC 17024
| || || || || ||||| |||||||||||||| |||||||| || |||||||| | |
Sbjct 18052 AGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGC 17993
Query 17025 CGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATA 17084
|||| ||| |||||||| || | ||| ||||||| || || || ||||||||||| |
Sbjct 17992 CGGGTATCAGACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGA 17933
Query 17085 TACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAA 17144
| || || || | ||||| || | || ||||| | ||||| || ||||||| | |
Sbjct 17932 TTCCTTCCACTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCTCTTTGTCCCCGA 17873
Query 17145 TCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAA 17204
|||| | |||| || || || | ||||| ||| ||| || || || || || |
Sbjct 17872 TCCAGCACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGA 17813
Query 17205 ATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262
| | | ||| |||| | | | || | || || || || ||||| || || |||||
Sbjct 17812 AGAGAAATTCCCTTTCTTTGGAA--TCTTTAATGTAAGTGTCAATGAGGAGACTATACAT 17755
Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322
||| || || ||||| |||||||| || | || || || || || |||||||||| ||
Sbjct 17754 TTCAGAATGGATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCCGTAAT 17695
Query 17323 TTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382
|||||||| | || | ||| | | ||||| || || ||||| || || || ||
Sbjct 17694 CTGAACTTCTTGGCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGC 17635
Query 17383 GAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTC 17442
|| || |||| |||||| |||||||||| | || || || | || | |||||
Sbjct 17634 AAAGAAAGCCAGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTG 17575
Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502
|| | || ||||| | ||||| ||||| | |||||||| |||| | || || ||
Sbjct 17574 CTGAATGTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTT 17515
Query 17503 ATACATATTCCAAATATCATTGTATT 17528
|||||| | ||||||||||| |||||
Sbjct 17514 ATACATCTGCCAAATATCATGGTATT 17489
>seq404197
Length=65104
Score = 242 bits (268), Expect = 4e-59
Identities = 578/868 (67%), Gaps = 8/868 (1%)
Strand=Plus/Minus
Query 16664 ACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGA 16723
|| ||||| || || || |||| || | || || || |||||||| || || || ||
Sbjct 53076 ACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 53017
Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAG-TAG-CTGAAAATATTTTAGAGTACCCCA 16781
|| |||||||||| || ||||| ||||| || ||||||| || | | ||||
Sbjct 53016 GAACTATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAA--AACCCA 52959
Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841
| || || | ||| || || | |||| || || || ||| || |||| ||||
Sbjct 52958 GCTCCAGCATAAGTCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCGCAATTCA 52899
Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901
| || || || || | | || ||||| | || || ||||| ||| || |
Sbjct 52898 TCCCAATGAGCTTCACTGTCGGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACTGCAT 52839
Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCA 16961
||||| |||| | ||| || ||| | ||| || ||||| |||||||
Sbjct 52838 TGACGATAATTTCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCA 52779
Query 16962 GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCA 17021
| | || || || || ||||| |||||||||||||| |||||||| || |||||||| |
Sbjct 52778 GGAAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGA 52719
Query 17022 ACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGA 17081
||||||||| ||||| |||||| | ||| ||||||| || || || ||||||||||
Sbjct 52718 GGCCGGGCATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGA 52659
Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTAC 17141
| || || || || | ||||| || | | || | |||| | || |||||||
Sbjct 52658 AGATTCCTTCCACTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGCCTCTTTGTCCT 52599
Query 17142 GAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCT 17201
||||| | |||| || || || | ||||| ||| ||| || || ||||| |
Sbjct 52598 CGATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATGGCGT 52539
Query 17202 T--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259
| | | || ||| |||| | | | | || || || || || ||||| || || ||
Sbjct 52538 TGAAGAGAAATTCCCTTTCTTTGGAATCTTGA--ATGTAAGTGTCAATGAGGAGACTATA 52481
Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319
|||||| || |||||||| |||||||| || || || || || || | |||||||||
Sbjct 52480 CATTTCCGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAATAATGGGCTTCCGT 52421
Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379
|| |||||||| | | || ||| | || ||||| || || | |||||| || ||
Sbjct 52420 AATCTGAACTTCTTGGCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCGTCACTTGC 52361
Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCA 17439
|| | || | || | |||| | |||||||| | || || || | || | ||
Sbjct 52360 TGCAGAGAAAGGCAGGACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCG 52301
Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499
|| || | || ||||| | ||||| || || | ||||| || |||| | || ||
Sbjct 52300 GTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCCGTCCAGAAGGAAGCCTCAGCGTT 52241
Query 17500 TTTATACATATTCCAAATATCATTGTAT 17527
||| |||| | |||||||||| ||||
Sbjct 52240 CTTACACATCTGCCAAATATCACGGTAT 52213
>seq418289
Length=29330
Score = 102 bits (112), Expect = 8e-17
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
||||||||||||| |||||||| || |||||||| | ||||||||| |||||||| |
Sbjct 26792 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGACCTCGTTTTT 26733
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||||| || || || ||||||||||| || || || || | ||||| |
Sbjct 26732 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 26673
Query 17106 C 17106
|
Sbjct 26672 C 26672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514819143901920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |