Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq344518 464 4e-126
seq372917 461 5e-125
seq408533 419 2e-112
seq289427 260 1e-64
seq389895 224 7e-54
seq397970 221 9e-53
seq317162 197 1e-45
seq167425 168 5e-37
seq383823 127 1e-24
seq273439 123 2e-23
seq370543 111 1e-19
>seq344518
Length=1300
Score = 464 bits (514), Expect = 4e-126
Identities = 457/588 (78%), Gaps = 13/588 (2%)
Strand=Plus/Plus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| ||||| |||| ||||||||||||||||||||| | ||||
Sbjct 507 AAAACACTTTCACATTAATCGTTCTTTTCATGTACTTCAAATTTGTACTTAATGCCTTTC 566
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
||||| || |||| ||||||||||| |||||||||| | |||||| ||||| || | |
Sbjct 567 TCTTCCTGGACATCAGAAAGAACACCTGGATATTCTGGGATAAGTTTATATTTTTCCAAA 626
Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
| || |||||||||||| ||||||| |||||| |||||||||||||| |||||||| |||
Sbjct 627 TTAATTTCTGGAAAAAATGTGTCACTTTCAAATTCTTGCATGATCCTTGTCACAAATAGT 686
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
|||||| || ||| | |||| ||||| ||||| |||||||| ||| | | ||||||
Sbjct 687 CTAAGATGGCCTGGTTTGTTCATGGCTTCCTTATAAACAGAACTGCCTGCCACTATCCAA 746
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254
|||||||| ||| |||||| ||||||| | || || |||||||||| |||||||| | |
Sbjct 747 ACCATGTCCACTCTATTTGTTAATTCTCGTTGCTCAATAAGTTTTAATGCATCATCCAGA 806
Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314
|| || || | |||| |||||| |||||| | ||||| ||||| | ||||||| | |
Sbjct 807 CTTTTGGCAAGAAAAGGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTAATGAGAACTATA 866
Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTC----AGGAATTGAGAACCAAGTCTTTTT 4370
||||||||| | ||||||| || |||||||| | |||| |||||||| || || |
Sbjct 867 TTAATTCTGTCCCTTAAAGGTCGATTCTTCTCTGGAATGAATGGAGAACCAGGTTTTCCT 926
Query 4371 ACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAA 4430
|||||||||||| |||||||||||| || | | ||||| || || ||||||||||||||
Sbjct 927 ACCCATAATCACCAAATTCTGTTTACCTTCTGCTGAAGAGGTTGTGGTCATTCTTTGGAA 986
Query 4431 ATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGT--TTGCCAATGCCC 4488
|| | | |||||| | || ||||| |||| || || ||| ||||| ||||||
Sbjct 987 ATACCTGTATTCATTCCTGAGCAGGGGCCAGGGCAGGT--CCCTGTTCTTGCCGATGCCC 1044
Query 4489 ATGTTTTGAGC-----TACAGCAACAATGCAGTTTAGTGCTTGAACCA 4531
||||| || | ||||| || |||| |||||||| ||||||
Sbjct 1045 ATGTTCTGCCCATGTACACAGCGACCATGCGGTTTAGTGGACGAACCA 1092
>seq372917
Length=39490
Score = 461 bits (510), Expect = 5e-125
Identities = 441/565 (78%), Gaps = 0/565 (0%)
Strand=Plus/Minus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| ||||| |||||||||||||||||||||||||| | |||||| || || ||||
Sbjct 28380 ATTAATTGTTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACAT 28321
Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087
|||| |||| |||||||||||| | ||||| |||| || | ||||| ||||||||
Sbjct 28320 CAGAAGGAACCCTTGGATATTCTGGGAGGAGTTTACATTTTTCCAAATCAATTTCTGGAA 28261
Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147
||| ||||||| |||||| || ||||||||||| |||||||| || |||||| || ||
Sbjct 28260 AAATTGTGTCACCTTCAAATTCCTGCATGATCCTTGTCACAAATAGACTAAGATGGCCTG 28201
Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207
| | || | ||||| || || |||||||| ||||| | |||||| |||||||| ||||
Sbjct 28200 GCTTGTTCCTGGCTTCCTTGTAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTT 28141
Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267
|||||| ||||||||| || || ||||||||||| |||||||| | ||| || || | ||
Sbjct 28140 TATTTGTTAATTCTGGTTGCTCAGTAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAA 28081
Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327
|||| ||| |||||| | ||||| ||||| | |||||||| | |||||||||| |
Sbjct 28080 AATGCACTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTTCT 28021
Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387
||||||| || |||||||| |||| ||||| || ||||| ||||||||||||| ||||
Sbjct 28020 TTAAAGGTCGATTCTTCTCTGGAAAGGAGAAGCAGGTCTTCCTACCCATAATCACCAAAT 27961
Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447
|||||||| || ||| ||||| || || |||||||||||||||| | | ||||||
Sbjct 27960 TCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTTTGGAAATACCTGTATTCATTCC 27901
Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507
| || ||||| |||| || || | ||||| ||||||||||| || | | || |
Sbjct 27900 TGAGCGGGGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGGGACAGAGTGA 27841
Query 4508 CAATGCAGTTTAGTGCTTGAACCAT 4532
| ||||||||| | |||||||
Sbjct 27840 TGACGCAGTTTAGCGAACGAACCAT 27816
>seq408533
Length=33819
Score = 419 bits (464), Expect = 2e-112
Identities = 412/531 (78%), Gaps = 3/531 (1%)
Strand=Plus/Plus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| ||||| |||||| |||||| |||||||||| | ||||
Sbjct 26806 AAAACACTTTCATATTAACTGTTCTTTTCATAT---TCAAATCTGTACTTAATGCCTTTC 26862
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
|| || || |||| |||| |||||| |||||||||| | |||||| ||||| || | |
Sbjct 26863 TCCTCCTGGACATCAGAAGGAACACCTGGATATTCTGGGAGAAGTTTATATTTTTCCAAA 26922
Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
||| |||||||||||| |||||| |||||| || ||||||||||| |||||||| |||
Sbjct 26923 TCAGTTTCTGGAAAAAATGTGTCATTTTCAAATTCCTGCATGATCCTTGTCACAAATAGT 26982
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
||||| || ||| |||| ||||| || || || ||||| ||| | |||||||
Sbjct 26983 CGAAGATGGCCTGGCCTGTTCATGGCTTCCTTGTAAACGGAACTGTGTCCCACTATCCAG 27042
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254
|||||||| ||||||| || ||||||||| || || |||||||||| |||||||| | |
Sbjct 27043 ACCATGTCCACTTTATATGTTAATTCTGGTTGCTCAATAAGTTTTAAGGCATCATCCAGA 27102
Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314
|| || || | ||||||||||| |||||| | ||||| ||||| | |||||||| | |
Sbjct 27103 CTTTTGGCAAGAAAATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATA 27162
Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374
||||||||| | ||||||| || |||||||| ||||| |||||||| ||||| |||||
Sbjct 27163 TTAATTCTGTCCTTTAAAGATCGATTCTTCTCTGGAATGGAGAACCAGGTCTTCCTACCC 27222
Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434
|||||||| |||||||||||| || | | ||||| || || ||||||||||||||||
Sbjct 27223 ATAATCACCAAATTCTGTTTACCTTCTGCTGAAGAAGTTGTGGTCATTCTTTGGAAATAC 27282
Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATG 4485
| | |||||| | || ||||| |||| || || | ||| |||||
Sbjct 27283 CTGTATTCATTCCTGAGCGGGGGCCAGGGCAGGTCCCCGTTCTTGACAATG 27333
>seq289427
Length=46734
Score = 260 bits (288), Expect = 1e-64
Identities = 210/254 (83%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 3976 TTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACATTAGAAAGA 4035
||||| |||||||||||||||||||||||||| | |||||| || || |||| |||| ||
Sbjct 23652 TTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACATCAGAAGGA 23711
Query 4036 ACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTG 4095
|||| |||||||||| | |||||||||||| || | ||||| |||||||||||| |||
Sbjct 23712 ACACCTGGATATTCTGGAAGAAGTTTGTATTTTTCCAAATCAATTTCTGGAAAAAATGTG 23771
Query 4096 TCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTC 4155
|||| |||||| | ||||||||||| || ||||| ||| |||||| || ||| |||
Sbjct 23772 TCACTTTCAAATCCCTGCATGATCCTTGTTACAAATAGTCTAAGATGGCCTGGCCTGCTC 23831
Query 4156 ATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCT 4215
|| ||||| |||| |||||||| ||||| | |||||| |||||||| |||||||||| |
Sbjct 23832 ATGGCTTCCGTATAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTTTATTTGTT 23891
Query 4216 AATTCTGGCTGTTC 4229
|||||||| || ||
Sbjct 23892 AATTCTGGTTGCTC 23905
Score = 96.9 bits (106), Expect = 2e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 4378 ATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTA 4437
||||| |||||||||||| || ||| ||||| || || |||||||||||||||| |
Sbjct 24035 ATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTTTGGAAATACCTG 24094
Query 4438 AAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGA 4497
| || || | || ||||| |||| || || | ||||| |||||| |||| ||
Sbjct 24095 TATTCTCTCCTGAGCTGAGGCCAGGGCAGGTCCCCGTTCTTGCCTATGCCCGTGTTCTGG 24154
Query 4498 GCTACAGCAACAATGCAGTTTAG 4520
| |||||| |||||||||||||
Sbjct 24155 GACACAGCATCAATGCAGTTTAG 24177
>seq389895
Length=30234
Score = 224 bits (248), Expect = 7e-54
Identities = 190/234 (81%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 4166 TATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGCT 4225
|||| || ||||| ||||| | |||||| |||||||| |||||||||| |||| |||| |
Sbjct 22840 TATAAACGGAACTGCCTCCCACTATCCAAACCATGTCCACTTTATTTGTTAATGCTGGTT 22899
Query 4226 GTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAA 4285
| || |||||||||| |||||||| | ||| ||||| | ||||||||||| ||||||
Sbjct 22900 GCTCAATAAGTTTTAAGGCATCATCCAGACTTTTAGCAAGAAAATGAGCTCCCTGTGGAG 22959
Query 4286 GCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCT 4345
| ||||| ||||| | |||||||| | |||||||||| | |||||||| || |||||||
Sbjct 22960 GTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTCTTCT 23019
Query 4346 CAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
| ||||| |||| ||| || || |||||||||||| || ||||||||| |||
Sbjct 23020 CTGGAATGGAGATCCAGGTTTTCCCACCCATAATCACCAAGTTCTGTTTACCTG 23073
Score = 91.5 bits (100), Expect = 1e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| |||| | |||||||||||||||||||||||| | |||||| || || ||||
Sbjct 22758 ATTAATTGTTCTATTTATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACAT 22817
Query 4028 TAGAAAGAACACTTGGATATTCTATCAA 4055
|||| |||||| ||||||| |||| ||
Sbjct 22818 CAGAAGGAACACCTGGATATCCTATAAA 22845
>seq397970
Length=5258
Score = 221 bits (244), Expect = 9e-53
Identities = 497/739 (67%), Gaps = 11/739 (1%)
Strand=Plus/Minus
Query 101534 TAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATAT-AATGTC 101592
||||||||||| | ||||||||| | ||||| || || ||| ||| ||| | || |||
Sbjct 2391 TAAACAGCCATTTCCATTTTAATAGTCGGGTGAGGATTGTAGCCTTC-AATCTGAAAGTC 2333
Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652
|| || || ||||||||||| ||| |||| | | ||| || | || || ||
Sbjct 2332 TTCAGCCTTGAAGTCATCAATTTTCTCAACTTTTCGAAGGATTCTGAGCTTGGGGAAAGG 2273
Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAG-AGCATCAATGTGATCTACATAGATGTGAG 101711
|| || |||| | ||| ||||| || ||| |||||||||| | || ||||| |
Sbjct 2272 CCTTGGTTCTCGCTGAAGCTGAATTTTCAGCAGC-TCAATGTGATTCAGGTAAATGTGTG 2214
Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771
||||||| | ||| || | ||| || || ||| || |||| || || ||||||
Sbjct 2213 CATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGTGCGATCATG- 2155
Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831
|| || | ||||| || ||||| || ||||| || | |||||||| |||| |
Sbjct 2154 ----TAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCCATATCTCCTGACC 2099
Query 101832 TTTGATACAGTTGACAGGAAAGCTTTCCAT-CACAGACATAAAATTGACTTAATACATGA 101890
| || ||||| || ||||| |||| || | ||| || || || || | | | ||
Sbjct 2098 TCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC-ACGTAGAACTGGCAAAGGGCGTGG 2040
Query 101891 CAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTT 101950
|| || || | |||| ||| | ||| |||||||||||||| | || |||
Sbjct 2039 CACGGGGGTAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGATGATTCTT 1980
Query 101951 CTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCT 102010
|| || |||||| ||||| || || ||| ||| | || | ||| || |||||||
Sbjct 1979 CTGTCGTCAGGGTTGGTTTTGATTGTGTCAGTCACTTTTTGCAGTTGATCTACTCCTTGA 1920
Query 102011 CCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCA 102070
|| |||||| | | | |||| ||||| || || ||||||||||||||||| |||
Sbjct 1919 TCTGAATAATCTGAATCCATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCA 1860
Query 102071 TACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGAT 102130
|| || || || | ||| ||||| ||||| | || || || | || || || |
Sbjct 1859 TAAACTGGGCCTAAATCCCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCT 1800
Query 102131 CTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTA 102190
| || ||||| |||||||| || | ||| || | || ||||| || || ||
Sbjct 1799 CGGGACCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTG 1740
Query 102191 GATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTA 102250
||||| |||||||||||| || || || |||||| | || || || | || ||
Sbjct 1739 GATCCCTTGATAAACCACAGCAACTCCTCCGAAACACCCTTGCAGAAAACACGTTTGGTT 1680
Query 102251 GTTAAAAGTGGAAATTCAT 102269
|| | || ||||||||||
Sbjct 1679 GTCAGCAGAGGAAATTCAT 1661
>seq317162
Length=29175
Score = 197 bits (218), Expect = 1e-45
Identities = 184/234 (79%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 4303 CTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAA 4362
|||||||| | |||||||||| | |||||||| || |||||||| ||||| ||||||||
Sbjct 9456 CTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCTGGAATGGAGAACCAT 9397
Query 4363 GTCTTTTTACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATT 4422
|| || ||||||||||||| ||||||||||| || ||| ||||| || || ||||||
Sbjct 9396 GTTTTCCTACCCATAATCACCGAATTCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATT 9337
Query 4423 CTTTGGAAATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCA 4482
|||||||||| | | |||||| | || ||||| |||| || || | ||||||
Sbjct 9336 CTTTGGAAATACCTGTATTCATTCCTGAGCGGGGGCCAGGGCAGGTCCCCGTTCTTGCCA 9277
Query 4483 ATGCCCATGTTTTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCATAATA 4536
||||||||||| || | |||||||| ||||||||||| | ||||||| |||
Sbjct 9276 ATGCCCATGTTCTGGGACACAGCAACGATGCAGTTTAGCGGACGAACCATGATA 9223
Score = 134 bits (148), Expect = 1e-26
Identities = 115/142 (81%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| ||||| ||||||||||||||||| |||||||| | ||||
Sbjct 9753 AAAACACTTTCACATTAATTGTTCTTTTCATATACTTCAAATTTATACTTAATGCCTTTC 9694
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
|| || || |||| |||| |||||| |||||||||| | |||||| ||||| || | |
Sbjct 9693 TCCTCCTGGACATCAGAAGGAACACCTGGATATTCTGGGATAAGTTTATATTTTTCCAAA 9634
Query 4075 TCAAATTCTGGAAAAAAGGTGT 4096
|||| |||||||||||| ||||
Sbjct 9633 TCAATTTCTGGAAAAAATGTGT 9612
>seq167425
Length=11198
Score = 168 bits (186), Expect = 5e-37
Identities = 170/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 26952 ACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAA 27011
|||||||| || || || |||||||| || | ||| ||||||||||| |||| || ||
Sbjct 7353 ACAATGGGGGTGACACAGGTGCAGCCCACGGCCACCAGCATCTTCTCCAGCCGGAAGGAG 7412
Query 27012 TTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAG 27071
| |||||| | ||| || | | |||| || || |||||||| ||||| ||||| |||
Sbjct 7413 TGGGGGCAGTGCTGAGGCTCCCTTCGCAGGACCAGGATCTCTTGCTGGATGGGGACGGAG 7472
Query 27072 TTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCT 27131
|||||||| | ||| || ||||| |||||||| ||||| || ||| || ||||| ||
Sbjct 7473 TTCATGTGATGGTCCACCTTCCCTTCAGCATTGACACAGCCCGAGTGGCTGCACTTGGCC 7532
Query 27132 TCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172
||||| ||||||||||| || || || | || ||||||||
Sbjct 7533 TCCCAGATCACAGAGGGGTACCTCTCAGGGTCCTCATTGCG 7573
>seq383823
Length=18616
Score = 127 bits (140), Expect = 1e-24
Identities = 100/120 (83%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224
||||| |||||||| ||||| | ||||||||||||||| ||| |||||| |||||||||
Sbjct 16853 TTATAAACAGAACTGCCTCCCACTATCCAGACCATGTCCACTCTATTTGTTAATTCTGGT 16794
Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284
||||| |||||||||| ||| |||| | ||| || || | ||||||||||| ||||||
Sbjct 16793 TGTTCAATAAGTTTTAAGGCACCATCCAGACTTTTGGCAAGAAAATGAGCTCCCTGTGGA 16734
Score = 118 bits (130), Expect = 8e-22
Identities = 92/110 (84%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| ||||| | |||||||| | |||||||||| | |||||||| || |||||||| ||
Sbjct 9584 CTTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCTGG 9525
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || || ||||||||||||| |||||||||||| |||
Sbjct 9524 AATGGAGAACCAGGTTTTCCTACCCATAATCACCAAATTCTGTTTACCTG 9475
>seq273439
Length=4507
Score = 123 bits (136), Expect = 2e-23
Identities = 377/571 (66%), Gaps = 20/571 (4%)
Strand=Plus/Minus
Query 101534 TAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATAT-AATGTC 101592
||||||||||| | ||||||||| | || || || | ||| ||| ||| | || |||
Sbjct 2565 TAAACAGCCATTTCCATTTTAATAGTGGGATGGGGACTGTAGCCTTC-AATCTGAAAGTC 2507
Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652
|| || || ||||||| || ||| |||| | | | | || |||| || ||
Sbjct 2506 TTCAGCCTTGAAGTCATAGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTGGGAAAGG 2447
Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAG-AGCATCAATGTGATCTACATAGATGTGAG 101711
|| || || | | ||||||||| || ||| ||||||||||| | || ||||| |
Sbjct 2446 CCTTGGTTCTCCCTGAAGCTGCATTTTCAGCAGC-TCAATGTGATCCAGGTAAATGTGTG 2388
Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771
||||||| | ||| || | | | || || ||| || |||| || || ||||||
Sbjct 2387 CATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGATCATGT 2328
Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831
| || | || | |||||| || | ||| || | ||| || | ||| | || |||| |
Sbjct 2327 AGGTGAGCAGGGCATAGCTGGCGACGTTGAAGGACACACCCAGGCCCCTGTCTCCTGACC 2268
Query 101832 TTTGATACAGTTGACAGGAAAGCT-TTCCATCACAGACATAAAATTGACTTAATACATGA 101890
| || ||||| || ||||| |||| | |||| || || || || | |
Sbjct 2267 TCTGGTACAGCTG-CAGGACAGCTCATGGTTCAC-CACGTAGAAGTGGC----------A 2220
Query 101891 CAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTT 101950
| |||||| | || ||||| ||| |||||||||||| | | || |||
Sbjct 2219 AAGGGCGGC-AGGGTATGAGAGGAAGATCT-TTTGATTCCAAGCACATAGAATGATTCTT 2162
Query 101951 CTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCT 102010
|| ||| ||| || ||||| || || ||||||| || || | |||||| |||||||
Sbjct 2161 CTGTCTTCAGGTTTGGTTTTGATTGTGTCAATCACCTTTTGCAGTTGGTCTACTCCTTGA 2102
Query 102011 CCTTTATA-ATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCC 102069
| | ||| || | ||| |||| ||||| || | ||| |||||||||||| |
Sbjct 2101 CGTGAATACATTTAAATCCACATCTTTGTATTCAGCCACCAAAGACCTCCACTGAAAGCT 2042
Query 102070 ATACACAGGTCCAAGATCTCCTTCATCTCTG 102100
|| || || || | ||| ||||| ||||||
Sbjct 2041 ATGAACTGGGCCTAAATCCCCTTCTTCTCTG 2011
>seq370543
Length=19059
Score = 111 bits (122), Expect = 1e-19
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115
|||||| ||||| || | ||||| |||||||||||| ||||||| |||||| || |||||
Sbjct 1478 AAGTTTATATTTTTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCAT 1419
Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166
|||||| |||||||| ||| |||||| || ||| | |||| ||||| ||
Sbjct 1418 GATCCTTGTCACAAATAGTCTAAGATGGCCTGGCTTGTTCATGGCTTCCTT 1368
Score = 91.5 bits (100), Expect = 1e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| ||||| |||||||||||||||||||||||||| | ||||
Sbjct 9266 AAAACACTTTCACATTAATTGTTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTC 9207
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047
|| || || | || |||| |||||| |||||||
Sbjct 9206 TCCTCCTGGATATCAGAAGGAACACCTGGATAT 9174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359395687850444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |