Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq233229 286 4e-72
seq397590 221 1e-52
seq385137 125 9e-24
seq418222 107 2e-18
seq393904 91.5 2e-13
seq31862 91.5 2e-13
>seq233229
Length=24662
Score = 286 bits (316), Expect = 4e-72
Identities = 266/338 (79%), Gaps = 0/338 (0%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
||||| || ||||| || ||||| | | | | |||| | ||||| |||||||||||||
Sbjct 20839 AGCAGAGCTTCGATATCAGGCTCGATGTCGATGGTCAGAAAGCGGCGGCTGTACCTGCGT 20898
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
||||| ||||| | ||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 20899 ACGGGAACACCGTCTGGGCCCACCAGGAACTTCTCGAAGTTCCAGGCAACGTCGTTGCGG 20958
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| |||| || |||||| ||| ||| | | |||||| ||
Sbjct 20959 CACACCGGAGACCAGGTGATGAACTTGGGGTCTGTCATGAGGGCAGTGGCGTCGTCACTG 21018
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
|||| ||||| ||||| || |||||||||||||||||||| ||| | | || || |||
Sbjct 21019 GGCGTGGGCAGAGCCTCCCGAAGGAAGGCGAAGAGCGGATGGGCCTTCTCGCCATTCACC 21078
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
|||||||||||||||||||| ||||| |||||||| ||| || || || |||| |||
Sbjct 21079 TCGCACTTCTCGAAGAGCATGAAGTTGGGCTCGAACCCGCCGCCTGGTCGTACGTACTTG 21138
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394
||| || || |||||| | |||| ||| ||||||||
Sbjct 21139 AGGCAATTCAGGATCTCCTCGTTCTTGGCATTTTCCTG 21176
Score = 183 bits (202), Expect = 4e-41
Identities = 167/211 (79%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || || |||||||| |||||||| || ||||| ||||| ||| | | || ||||
Sbjct 21450 CCTGATGCCCAAACTGGTTGCACGGGAAGCCGAGCACGACCAGGCCCTGGGGCCCGAGGC 21509
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
|||||||||| || |||||||| ||||| |||||||| || | |||||||| ||||| |
Sbjct 21510 GCCGCTGCAGGTCATTCATCTGGGTGTAGTCCCGGACAGTTGTGCCTCAGAGCGACGCCA 21569
Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570
||||||| ||||||| ||| |||||| | | | || ||| |||| || || || ||||
Sbjct 21570 CGTTCTCAATGAGCAGCACCTTGCCCCGCAGGGACCCCAAGTTCACGGGCTCCCCGCCGG 21629
Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601
| |||||| || |||||||||||||| ||
Sbjct 21630 CCAGCGGGCGCGCAGAGAAGGCGTACACCGA 21660
>seq397590
Length=12394
Score = 221 bits (244), Expect = 1e-52
Identities = 282/389 (72%), Gaps = 11/389 (3%)
Strand=Plus/Plus
Query 83158 CCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAG 83217
||||||||| || |||| ||||| ||||||||| |||| || ||||||| || |||
Sbjct 11404 CCAGGCCACTTCTTTGCCACACACCAGAGACCAGGTGATGAACTTGGGGTCGGTCCTGAG 11463
Query 83218 CGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATG 83277
| | | || | || |||| ||||| ||||| || ||||||||||||||||| |
Sbjct 11464 GGCAGTGGCGGCGACACTGGGCGTGGGCAGAGCCTCACGAAGGAAGGCGAAGAGCGGGTA 11523
Query 83278 TGCCCTTGCACCGTTGACCTCGC--------ACTTCTCGAAGAGCATAAAGTTCGGCTCG 83329
||| | || || ||||||| |||||||||||||||| ||||| ||||||
Sbjct 11524 CGCCTGCGAGCCATTCACCTCGCGCTTCTCCACTTCTCGAAGAGCATGAAGTTGGGCTCG 11583
Query 83330 AAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTT 83389
|| | ||| || || | ||||| ||| ||| || | ||||||| || |||||||||
Sbjct 11584 AACCTGTTGCCTGGTCTGACGTACTTGAGGCAATTTAGGATCTCG---TTTTGGGCGTTT 11640
Query 83390 TCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGG 83449
||||| || || ||| |||| |||| ||| | ||||| ||||| || || | || |||
Sbjct 11641 TCCTGATGCCCAAACCGGTTGCACGTGAAGCTGAGCACAACCAGGCCTCGGGGCCCGAGG 11700
Query 83450 CGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCT 83509
||||| |||||| |||| ||| |||| ||| ||||| | |||| ||| || ||
Sbjct 11701 AGCCGCCTCAGCTCCTTCACCTGGGTGTCGTCCTGGACCCCTGTGCCTCCGAGCGATGCC 11760
Query 83510 ACGTTCTCGATGAGCAAGACCCGGCCCCG 83538
| || ||| ||||||| | ||| |||||
Sbjct 11761 AAGTCCTCAATGAGCAGGGCCCTACCCCG 11789
>seq385137
Length=21275
Score = 125 bits (138), Expect = 9e-24
Identities = 195/268 (73%), Gaps = 8/268 (3%)
Strand=Plus/Plus
Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468
||| ||||||| || |||| | ||| || ||| || |||||| || || |||
Sbjct 6586 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATTGGCAACTTTGCCTCACGCCTGC 6644
Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528
||||| || |||| || |||||||| || |||||||||| || ||| | |||||||
Sbjct 6645 TCGTGCACCTGTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTGCA 6704
Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGC-GCTTGCTCCGGCACTA 50586
||||||| |||||||| |||| || |||||| ||| | |||| |||| |||||
Sbjct 6705 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGTCCCGCATCAAGCTTA-TCCGCCACTA 6762
Query 50587 TGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAA-AGTTCCTGG 50645
|||||| |||| ||||| ||| || || ||||| |||| ||| ||||| |||
Sbjct 6763 CGTGCAGCTGCTCTACCCGCGGGCCAAGAATGACCGCGTCTGGA-CACTGGAGTTCGTGG 6821
Query 50646 CGTGCCTGGACGAGCGCTGCCGGCGCCG 50673
|||||||||||||||||||||||
Sbjct 6822 GCAAACTGGACGAGCGCTGCCGGCGCCG 6849
>seq418222
Length=65063
Score = 107 bits (118), Expect = 2e-18
Identities = 159/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 83059 CAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGCAC 83118
|||||| || | || |||||||| | || ||| | ||| ||||||||||| | ||||
Sbjct 24341 CAGGGCTTCAACGTTGGGCTCCATGTCCCTGGTTGGAAAGCAGTGGCTGTACCCGTGCAC 24282
Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178
||| || | ||||||| | ||||||| ||||||||||||||||| || |||
Sbjct 24281 AGGCACATTGTTGGGGCCCACCAGGGACTTCTCCAAGTTCCAGGCCACGTCACGGCAGCA 24222
Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238
| ||| || ||||| | | || |||| | ||| ||| | | || ||| | |
Sbjct 24221 CGCTGAAGGCCAGGTGAAGTACTTGGGGCCAGTCATGAGTGCAGGGACGTTGTCATTGGA 24162
Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCC 83282
||||||||| ||||| | | |||||| ||||||| |||||||
Sbjct 24161 CGCCGGCAGAGCCTCAGGAAAGAAGGC-AAGAGCGAGTGTGCCC 24119
>seq393904
Length=12816
Score = 91.5 bits (100), Expect = 2e-13
Identities = 301/459 (66%), Gaps = 38/459 (8%)
Strand=Plus/Minus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
||||||||| || |||||||| || ||| ||| |||||| | || ||||| |||||||
Sbjct 12109 GAACTTCTCTAACTTCCAGGCAACATCGCTGCAGCACACAG-AGCCCAGGTGATGAGCTT 12051
Query 83203 GGGGTC-GCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGA 83261
|| || ||| | ||| || ||||| || ||| |||| ||||| | ||||
Sbjct 12050 GGAATCTGCTGAA-AGCA-GCGGTTGTCGGCG---GGCTAGGGCAAGGCCTTCCACAGGA 11996
Query 83262 AGGCGAAGAGCGGATGTGCCCTTGCA--CCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319
||||| | ||| | |||| ||| || || | | | ||||||| ||| ||| | |
Sbjct 11995 AGGCGCAAAGCAG--GTGCATCTGCGTGCCATTCATCACACACTTCTGGAAAAGCGTGA- 11939
Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379
||| | || | |||| |||||| || | |||| |
Sbjct 11938 -------------------CCATCTCTGATGAGCTTGAGGGAATTCAGGCTCTCTTGGTA 11898
Query 83380 CTGGGCGTTTTCCTGGTGACCG-AACTGGTTACACGGGAACCCAAGCACTACCAGCCCCC 83438
|| || ||| ||||| || | | |||||||| | ||||| || ||||||||||| ||
Sbjct 11897 CTTGGTGTTCTCCTGATGCCTGGAACTGGTTGCGTGGGAAGCCCAGCACTACCAGGCCTG 11838
Query 83439 GAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTC 83498
| || || ||||||||| || ||||||||||||| | || | |||| | | || |
Sbjct 11837 GGGCAA--AGTTGCCGCTGCACCTGGTTCATCTGAGTGCAGTCTCAGACCTTTGTGCCGC 11780
Query 83499 AGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAG 83558
|||| | || | ||||| ||||| | ||| ||| | | ||| | |||| |||
Sbjct 11779 AGAGCAATGCCGCTTTCTCAATGAGTAGCACCGTGCCAGGCTGGGTGCCCAGGCTCCCAG 11720
Query 83559 GTTCTCCTCCGG--TAATCGGGCGTGCTGAGAAGGCGTA 83595
| || ||| || ||| |||| | | ||||||| |||
Sbjct 11719 GCTC-CCTAAGGGCTAA-CGGGTGCACAGAGAAGGTGTA 11683
>seq31862
Length=20554
Score = 91.5 bits (100), Expect = 2e-13
Identities = 102/132 (77%), Gaps = 6/132 (5%)
Strand=Plus/Plus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCT-AGG 83449
|||| || | ||||| || | |||||| || ||| | ||||| ||| | || || |||
Sbjct 1229 CCTGTTGCGCAAACTGCTTGCTCGGGAAGCCGAGCGCGACCAGGCCCGGGGCCCCCGAGG 1288
Query 83450 ---CGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTA-CCTCAGAGGGA 83505
|||||||||||||| |||||||| |||| |||||| |||| ||| |||| ||| ||
Sbjct 1289 TGCCGCCGCTGCAGCTCATTCATCTGGGTGTGGTCCCGGGCCGT-CTAGCCTCCGAGCGA 1347
Query 83506 CGCTACGTTCTC 83517
||| ||||||||
Sbjct 1348 CGCCACGTTCTC 1359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605589628017760
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