Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 271 8e-68
seq404197 269 3e-67
seq359707 118 1e-21
seq411564 111 2e-19
seq418776 98.7 1e-15
seq331670 95.1 1e-14
seq233743 95.1 1e-14
>seq366024
Length=42324
Score = 271 bits (300), Expect = 8e-68
Identities = 535/786 (68%), Gaps = 4/786 (1%)
Strand=Plus/Plus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650
|| ||| ||||||| || || || || || || |||||| || || |||| |||||
Sbjct 17455 GAAAACACCCGCCGCTTTGTCATCTTTCCTATCAAATACCATGATATTTGGCAGATGTAT 17514
Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACA-CGAG 116709
|| || || ||||| || || ||||| | || ||||||||||| |||||||||| ||
Sbjct 17515 AAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGACCTTTCCAAGGACATTCAG 17574
Query 116710 CGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTT 116769
| ||||||| | |||| | ||| | ||||||| ||| | ||||| || ||
Sbjct 17575 C-ACTGGGAAGCCCTGAAGCCTGAGGAGAGATATTTCATTTCGCATATTCTGGCTTTCTT 17633
Query 116770 CGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC-GTTTCGCTCAGGAGGTGC 116828
|| || || || ||||| || || || || |||| |||| |||| || || || || |
Sbjct 17634 TGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCAGTTTAGC-CAAGAAGTTC 17692
Query 116829 AGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGG 116888
|| | | || || || || ||||| ||||| | || |||||||| ||| | || || |
Sbjct 17693 AGATTACGGAAGCCCGTTGTTTCTATGGCTTCCTAATTGCCATGGAAAACATCCATTCTG 17752
Query 116889 AAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGT 116948
|||||||| |||||| ||||| ||| | ||| | || | | | | |
Sbjct 17753 AAATGTATAGTCTCCTCATTGACACTTACATTAAAGATTCCAAAGAAAGGGAATTTCTCT 17812
Query 116949 TGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGA 117008
| ||||| || ||||| ||||| || || || ||||||| || ||||| || ||||||
Sbjct 17813 TCAACGCTATTGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGTGCTGGA 17872
Query 117009 TCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068
||| | || |||||| | | || || || | || ||||| || || || || ||
Sbjct 17873 TCGGGGACAAAGAGGCTACGTATGGAGAACGTTTCGTAGCCTTTGCTGCAGTGGAAGGAA 17932
Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128
|||||||||| || ||| || | ||||| |||||||| ||||| || || || ||||
Sbjct 17933 TCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAAAAACGAGGTCTGATACCCG 17992
Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188
|||| || || ||| || || || ||| ||||||||| | || || ||||||||||
Sbjct 17993 GCCTCACATTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCT 18052
Query 117189 GTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCA 117248
| || | ||||| || || | || ||| | | | | |||| | || ||
Sbjct 18053 GCCTGATATTCAAACACCTGCTACACAAACCTTCGGAGCAGAGAGTCAAATAAATAATCG 18112
Query 117249 CCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGG 117308
| | || || || || ||| |||||||| || || ||||| ||| || | |
Sbjct 18113 TCAATGCAGTTAGAATAGAACAGGAGTTCCTCACGGATGCCCTGCCAGTGAAGCTCATTG 18172
Query 117309 GACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCG 117368
| | |||||| |||| ||| |||||||| ||||| || ||||| || ||| |
Sbjct 18173 GGATGAATTGCACTTTGATGAAGCAGTACATCGAATTCGTGGCAGACAGACTTATGCGGG 18232
Query 117369 AGCTGG 117374
||||||
Sbjct 18233 AGCTGG 18238
>seq404197
Length=65104
Score = 269 bits (298), Expect = 3e-67
Identities = 535/784 (68%), Gaps = 6/784 (1%)
Strand=Plus/Plus
Query 116594 AACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAA 116653
||||||||||| | || | || || || ||||| || || |||| |||| ||
Sbjct 52181 AACCCCCGCCGCTCTGTCTTCTTTCCTATCGGATACCGTGATATTTGGCAGATGTGTAAG 52240
Query 116654 AAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG-AGCGA 116712
|| || ||||| || |||||||| | |||||||||||||| |||||||||| |||
Sbjct 52241 AACGCTGAGGCTTCCTTCTGGACGGCTGAGGAGGTGGACCTTTCCAAGGACATTCAGCAC 52300
Query 116713 CTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC-G 116771
| || ||| || ||| | ||| | |||||| ||| || ||| ||||| || |
Sbjct 52301 CGGGAAGCCCT-GAAGCCTGAGGAGAGATATTTCACTTCGCATGTCCTG-CCTTTCTCTG 52358
Query 116772 CCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT-TTCGCTCAGGAGGTGCAG 116830
| || || |||||| | || || || || ||||| ||||| || || || || || |||
Sbjct 52359 CAGCAAGTGACGGCGTAGTAAATGAAAACCTGGTGGAGCGGCTTAGC-CAAGAAGTTCAG 52417
Query 116831 GTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAA 116890
| | || || | | ||||| ||||| || ||||||||||| ||| | || ||||||
Sbjct 52418 ATTACGGAAGCCCATTATTTCTATGGCTTCCAAATCGCCATGGAAAACATACATTCGGAA 52477
Query 116891 ATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTG 116950
|||||| |||||| ||||| ||| | | ||| | || | | | | ||
Sbjct 52478 ATGTATAGTCTCCTCATTGACACTTACATTCAAGATTCCAAAGAAAGGGAATTTCTCTTC 52537
Query 116951 AACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATC 117010
|||||||| ||||| ||||| || || || ||||||| || ||||| |||||||||||
Sbjct 52538 AACGCCATTGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATC 52597
Query 117011 GCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTC 117070
| | || |||||| | | | |||| | || ||||| || || || || || ||
Sbjct 52598 GAGGACAAAGAGGCTAGGTACTGAAAGCGTGTCGTAGCCTTTGCCGCAGTGGAAGGAATC 52657
Query 117071 TTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGC 117130
|||||||| || ||| || | ||||| |||||||||||| | || || |||||||||
Sbjct 52658 TTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAATGAGGACTGATGCCCGGC 52717
Query 117131 CTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGT 117190
|| || || ||| || || || ||| ||||||||| | || || ||||||||||
Sbjct 52718 CTCACATTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTTC 52777
Query 117191 TTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACC 117250
|| ||||||| || || | || ||| | | | | |||| || || || |
Sbjct 52778 CTGATGTTCAAACACCTGCTACACAAACCTTCGGAGCAGAGAGTCAAAGAAATTATCGTC 52837
Query 117251 GACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGA 117310
| || || || || ||| |||||||| || || | | | ||| || | ||
Sbjct 52838 AATGCAGTTAGGATAGAACAGGAGTTCCTCACGGAGGCCCCGACAGTGAAGCTCATTGGG 52897
Query 117311 CTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAG 117370
| ||||||| |||| ||| |||||| | ||| | || ||||| || |||| |||
Sbjct 52898 ATGAATTGCGCTTTGATGAAGCAGTACATCAAATTCCTGGCAGACAGACTTATGCTGGAG 52957
Query 117371 CTGG 117374
||||
Sbjct 52958 CTGG 52961
>seq359707
Length=5412
Score = 118 bits (130), Expect = 1e-21
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| || || | || ||||| ||||||||| | || || || ||
Sbjct 2795 AAAATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGTCC 2736
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| |||| | | | |||| | |||| || || | || ||||| ||||||||| | ||
Sbjct 2735 AGTGACACCATCAAGAACG-TGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGA 2677
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | ||||||| || |||||||||||||| || | | ||| | || ||
Sbjct 2676 CCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCACACTCCTTCTGATTA 2617
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|| ||||||||| ||| | || ||||| || || | || ||||||| |||
Sbjct 2616 CAGCATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 2565
>seq411564
Length=61085
Score = 111 bits (122), Expect = 2e-19
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || |||| || || || |||||||| ||||||||| | || || || |||
Sbjct 40671 ATGCAGATCTTCGGGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 40612
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG--GACC 40807
|||| | | | | | |||| || || | || || || ||||||||| | ||||
Sbjct 40611 GACACCATCAAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCCCCGACC 40552
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| | ||||||| || |||||||||||||| |||| ||||| | || ||||
Sbjct 40551 AGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGACGGCCGCACTATTTCTGATTACA 40492
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||| ||| | || ||||| || || | || | ||||| |||
Sbjct 40491 ACATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTAAGGGGTGGC 40442
>seq418776
Length=96061
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || | |||| ||||||||| | || || || |||
Sbjct 54879 ATGCAGATCTTCGTGAAGACCCTGANNNGCAAGACCATCACCCTGGAGGTGGAGTCCAGT 54938
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | || || || ||||||||| | ||| ||
Sbjct 54939 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACTAG 54998
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || |||||||||||||| || | |||| || || ||||||
Sbjct 54999 CAGAGGCTTATCTTTGCAGGCAAACAGCTGGAAGATGGCTGCACTCTTTCTGATTACAAC 55058
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||| ||| | || |||| || || | || ||||||| |||
Sbjct 55059 ATCCAGAAAGAGTCAACATTGCACCTGGTCCTCCGTCTGAGGGGTGGC 55106
>seq331670
Length=23129
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||| | || || || || |||| ||||||||| | || || || |||
Sbjct 22182 ATGCAGATCTTCATGAAGACCCTGACCTGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 22123
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || | | || | | || || | || ||||| ||||||||||| ||||||
Sbjct 22122 GACACCGAGAATGTCCTGGATGCCAAGATCCAGGATAAAGAAGGCATCCCCGCTGACCAG 22063
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||| ||| || ||||||||| |||| || | ||||| || || ||||||
Sbjct 22062 CAGAGGCTCCTCTTTGCAGGCAAACAGATGGAAGATGGCCGCACTCTTTCTGATTACAAC 22003
Query 40870 ATCCAGAAGGAG 40881
|||||||| |||
Sbjct 22002 ATCCAGAAAGAG 21991
>seq233743
Length=26381
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
|| ||||| ||||||||| | || ||||| | ||||||| || ||||||||||||||
Sbjct 21111 GATAAAGAAGGCATCCCCCCTGATCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAA 21170
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||| || || |||| ||||||||| ||| | || ||||| || || |
Sbjct 21171 GACGGCCGCACTCTTTCTGATTACAGCATCCAGAAAGAGTCGACCCTGCACCTGGTCCTC 21230
Query 40903 CGCTTGAGGGGCGGC 40917
|| ||||||| |||
Sbjct 21231 CGTCTGAGGGGTGGC 21245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512504999493440
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