Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq411564 98.7 9e-16
seq418776 91.5 1e-13
seq359707 84.2 2e-11
seq364176 82.4 7e-11
>seq411564
Length=61085
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | ||||||||||| || ||||||||||| |||||||| || ||
Sbjct 40461 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTCC 40520
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATC--GGGAGGTATGCCCTCCTTGTCTG 118647
|||||||| || || ||||||| | |||||| || ||| || ||||| ||||| ||
Sbjct 40521 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTATCCT 40580
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
|| || || || | | || |||||| || ||| ||||| | ||| | || |
Sbjct 40581 GGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCT 40640
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| ||||| || || | || ||||||||
Sbjct 40641 TGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 40671
>seq418776
Length=96061
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | ||| |||||||| || ||||||||||| | ||||| ||| ||
Sbjct 55087 ACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCC 55028
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || |||| || | ||||| || || || ||||| ||||| ||
Sbjct 55027 AGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGGATGCCTTCCTTATCCTGG 54968
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| || ||| ||||| | ||| | || |||
Sbjct 54967 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTG 54908
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| |||| || || || || ||||||||
Sbjct 54907 CNNNTCAGGGTCTTCACGAAGATCTGCAT 54879
>seq359707
Length=5412
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | ||||||||||| || ||| ||||||| |||| | ||| ||
Sbjct 2584 ACCAGGTGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGTGGCCATCTTCC 2643
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || ||||||| | |||||| || || || ||||| || || ||
Sbjct 2644 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 2703
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | | || |||||| || ||| ||||| | ||| | || |||
Sbjct 2704 ATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTG 2763
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || || ||||||||
Sbjct 2764 CCAGTCAAGGTCTTCACGAAGATCTGCAT 2792
>seq364176
Length=18321
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| ||| | | ||||||||| | || | || ||||| |||||| |||||| ||
Sbjct 5338 ACCACCGTGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGA 5397
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || ||| || || || || ||||| |||| || | ||||| || |||||
Sbjct 5398 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 5457
Query 118631 TATGCCCTCCTTGTC-TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
|| || ||||| || || | || ||||| | | ||| || ||| | ||||
Sbjct 5458 AATTCCTTCCTTATCCTGGATCTTGGCGTTTA-CATTTTCTGTTGTATCCAAGGGTTCGA 5516
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || | || || || ||||| || || || |||||||||||
Sbjct 5517 CCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 5565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 431602095767248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |