Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq411564 91.5 9e-14
seq418776 87.8 1e-12
>seq411564
Length=61085
Score = 91.5 bits (100), Expect = 9e-14
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| |||||||| |||||||| || || | ||| ||||
Sbjct 40458 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCT 40517
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC--ACGCTCTCCTTGT 34295
|||| ||| |||||||| || ||||||| |||||||||| ||| | || ||||| |
Sbjct 40518 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTAT 40577
Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
| ||||| ||| | || || | || | | || || |||| |||||||
Sbjct 40578 CCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 40637
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| ||||| || || || ||| | |||||||||||
Sbjct 40638 TCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 40671
>seq418776
Length=96061
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| || || |||||||| |||||||| || || || | | | ||
Sbjct 55090 AGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCT 55031
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| |||||||| || || |||| ||||| ||| ||| | || ||||| ||
Sbjct 55030 TCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGGATGCCTTCCTTATCC 54971
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | || | || || || |||| ||||||||
Sbjct 54970 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTC 54911
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| | || || ||||| |||||||||||
Sbjct 54910 TTGCNNNTCAGGGTCTTCACGAAGATCTGCAT 54879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 321412589536640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |