Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq375440 2017 0.0
seq366492 109 4e-19
>seq375440
Length=19304
Score = 2017 bits (2236), Expect = 0.0
Identities = 1490/1740 (86%), Gaps = 51/1740 (3%)
Strand=Plus/Plus
Query 107068 CCAG-TCCTAACTCCAGTCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGT 107126
|||| |||| | ||| ||||||| || | |||||||| || |||||||| ||| |
Sbjct 13495 CCAGATCCTGATCCCAACCCCAGCACGATCAACTGGTTTGTAGTGTCAGGTTATAGACCT 13554
Query 107127 CCATCCACAAG-------------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTA 107173
||||| || | || |||||||||||||||||||||||||||||||
Sbjct 13555 CCATCAGTGAGCTGGGTGTGTGAAGTTCCTAGGCAGGACTTGACTGAGGATATTTGTCTA 13614
Query 107174 TAGAAGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGATGTTC--------TG-- 107223
|||||| | |||| ||| |||||||| ||||||||||||||||| | ||
Sbjct 13615 GAGAAGAAACCTATTTTTGCCATCACTTCGGAGTTGAACTTGATGTACCTTGAGCATGTT 13674
Query 107224 ---GATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTC---CTCCTCCACC 107277
| ||||||||||| | ||||||||||||||||||||||||| || ||||||| ||
Sbjct 13675 CCAGGTTAGTTTGTAACTGAAGGCATTTTGTTCTGTCCAAGGATTTCATCCTCCTCCTCC 13734
Query 107278 TTGCCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGA 107337
|| |||||||||||||||||| | |||||||| ||||||||||| | ||||| |||||
Sbjct 13735 TTCCCTGTGCCCAAACTCTCCCGGTCTCCCATTCCATGAAGATGATTAAGTGGAGGAAGA 13794
Query 107338 AGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTT 107397
| || ||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 13795 AACTCTGCGGGGGGCATCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCATTGTTG 13854
Query 107398 CTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGG 107457
|||||| |||||| |||||||| |||||||| |||||||| |||||||||| |||||||
Sbjct 13855 CTCTGAAACTTTCTCTCAGGTTAAAATGTGACATAGATTCCCTGGATCTGGAATCCAGGG 13914
Query 107458 ACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGA 107517
|||||| || |||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct 13915 ACTTCCGAAGCCAGCGCTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGA 13974
Query 107518 GATCCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCC 107577
||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||
Sbjct 13975 GATCCATCAACTGTTCTGGGATCACCCGAGGGGACCAGGAAGCAGTGGTCAAGGCTCTCC 14034
Query 107578 TAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACA 107637
| ||||| |||||||| ||||| |||||| |||| |||| | |||| ||||||||||||
Sbjct 14035 TGGACAATCTGGAAGTCAAGAAGAAGCGGGAGCCTTTCACAGACACCGATTACCTCAACA 14094
Query 107638 TAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTA 107697
| |||||||||||||||| || || |||| ||||||||||| |||||||||||||| |
Sbjct 14095 TGACCAGAGACTGTGAGCAGTTTAAATCCCAGAGGAAGTTCATCCAGTTCCCACTGAGCA 14154
Query 107698 AAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACT 107757
||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 14155 GAGAAGAGTTAGACTTCCCCATCGCCTACTCTGTGGTGGTCCATGAGAAGATTGAAAACT 14214
Query 107758 TTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATG 107817
| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct 14215 TCGAACGGCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGCGTCCATGTGGATG 14274
Query 107818 TGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATG 107877
|||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 14275 AGAAGTCCCCAGAAACTTTCAAAGAGGCAGTCAAGGCCATCATTTCCTGCTTCCCAAATG 14334
Query 107878 TCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTG 107937
|||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||
Sbjct 14335 TCTTCATGGCCAGTAAGTTGGTCCGGGTGGTTTACGCCTCCTGGTCCAGGGTGCAGGCTG 14394
Query 107938 ACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATA 107997
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 14395 ACCTGAACTGTATGGAAGACTTGCTCCGGAGCTCAGTGCCATGGAAATACTTACTGAATA 14454
Query 107998 CATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGT 108057
| || |||||||| || || |||||||||||||| |||||||||||||||||||||||||
Sbjct 14455 CGTGTGGGACAGATTTTCCTATAAAGACCAATGCTGAGATGGTCCTGGCCCTCAAGATGT 14514
Query 108058 TGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGA 108117
|||| || ||||||||||||||||| ||| ||||| |||||| |||||| ||||||||
Sbjct 14515 TGAATGGGAAGAACAGTATGGAGTCCGAGATACCTACTGAGTACAAAAAGTCTCGCTGGA 14574
Query 108118 AATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCC 108177
|||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct 14575 AATACCACTATGAGGTGACAGACACATTGCACCTAACCAGCAAGATGAAGGACCCTCCCC 14634
Query 108178 CTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCC 108237
||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 14635 CTGATAACTTACCTGTGTTCACGGGGAATGCCTATTTTGTGGCTTCTCGAGCCTTTGTCC 14694
Query 108238 AACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATA 108297
||||||||||||| ||||| ||||||||||||||| | ||||||| |||||||||||||
Sbjct 14695 AACATGTCTTAGAGAACCCCAAATCCCAAAGACTGATCGAATGGGCAAAAGACACCTATA 14754
Query 108298 GCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTC 108357
|||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 14755 GCCCGGATGAACACCTCTGGGCCACCCTTCAGCGTGCACCGTGGATGCCTGGCTCTGTCC 14814
Query 108358 CTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGC 108417
| ||||||||||| |||||||||||||||||| ||||| |||||||| ||||| ||||
Sbjct 14815 CCTACCACCCCAAGTTTCACATCTCAGACATGACCGCCATTGCCAGGCTGGTCAAATGGC 14874
Query 108418 AGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATC 108477
|| ||| |||||||| |||| |||||||| ||||||||||| |||||||||||||| |
Sbjct 14875 AGCTCCATGAGGGAGACATCAGTATGGGGGCACCTTATGCACCTTGCTCTGGAATCCACC 14934
Query 108478 GGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACC 108537
| |||| ||||||||||| ||||| ||||||||| |||||||||| ||||| |||||||
Sbjct 14935 AGCGGGCTATCTGCATTTATGGGGCTGGGGACCTGCACTGGATTCTTCAGAATCATCACC 14994
Query 108538 TCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGT 108597
||||||| |||||||||||||| | |||||| |||||||| |||||||||||||||||||
Sbjct 14995 TCTTGGCGAACAAGTTTGACCCAAAGGTGGACGATAACGTTCTGCAGTGCTTAGAAGAGT 15054
Query 108598 ACCTACGTCATAAGGCCATCTATGGGACTGAACTTTGAG----------------CTGCA 108641
| ||||| ||||||||||||||||||||||||| |||| ||||
Sbjct 15055 ATTTACGTTATAAGGCCATCTATGGGACTGAACTCTGAGAAACACCGTGAGAGGATTGCA 15114
Query 108642 --CTGTGGGCCAGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGG 108698
| | ||| |||| || ||| | ||| |||| || | |||| || |||||||||||
Sbjct 15115 ACCCGAGGGGCAGGAACATGTACAAACGTGCCTAGAACACGCTGGGACAGTGTGGGGTGG 15174
Query 108699 GGGACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCTTTGATGGGGT 108758
| ||| |||||| ||||||||||||| |||||| ||||||| |||||||| | ||||||
Sbjct 15175 GAGACCAGGGCTCTGGAATCCATGGCCTCCCCCTGGGTCAGGGGGCTGCTCT--TGGGGT 15232
>seq366492
Length=15653
Score = 109 bits (120), Expect = 4e-19
Identities = 568/891 (64%), Gaps = 33/891 (4%)
Strand=Plus/Plus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || |||||||||||| ||| || || || || || || | ||||| ||| | ||
Sbjct 5269 CCCCTTAGTAAAGAAGAGGCAGAGTTTCCAATAGCATATTCTGTAGTGGTTCATCACAAA 5328
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||||| |||| |||| ||| | || | ||| |||||||| | || || |
Sbjct 5329 ATTGAAATGCTTGACAGGCTCCTGAGGGCTATTTATATGCCTCAGAATTTCTATTGCATT 5388
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
||||||||| || || || | || | || || | | |||| |||||
Sbjct 5389 CACGTGGATACAAAATCAGAGGAATCCTTTTTGGCCGCAGTGATTGGCATTGCATCCTGT 5448
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| ||||||||| |||||||| || ||| || || ||||| || ||| | |
Sbjct 5449 TTCAGTAATGTCTTCGTGGCCAGTCAGCTGGAGAGTGTTGTGTATGCATCTTGGAGCCGG 5508
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985
|| || |||||||| ||||| ||| | ||| | || | || | | || |||||||
Sbjct 5509 GTTCAGGCTGACCTCAACTGCATGCAGGACCT-CTACCGAA-TGAACGCAGACTGGAAGT 5566
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
|||| | ||| ||||| | || || || || || ||||| || || ||| |
Sbjct 5567 ACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 5626
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCCa 108102
|||||| ||| | ||| |||||| | || | ||| | || || | |
Sbjct 5627 AGCTCAAGTCGTTAATGGGCGAGAACAACCTAGAAACAGAGAGAATGCCATCCAAT---A 5683
Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AG--GTGACAGACACACTGT--ACCCT----A 108153
||||| | | |||||| | | |||| || |||| | | ||| | | | |
Sbjct 5684 AAAAAGAGAGGTGGAAAAAGCATTATGCAGTCGTGAATGGAAAGCTGACAAACATGGGGA 5743
Query 108154 CCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213
|| ||| || | ||||| | ||| | ||| |||| |||| | ||||||||
Sbjct 5744 CCGACAAAATACAT---CCTCCTCTTGAAAC---ACCTCTGTTTTCAGGCAGTGCCTATT 5797
Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273
|||||| | | | | ||| | |||| | || || ||| |||| ||
Sbjct 5798 TTGTGGTCAGTAGGAGGTATGTGGAGTATGTGCTCGAGAATGAAAAAATACAAAAGCTTA 5857
Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333
| || |||| |||||||| || ||||| ||||| | ||||||||||| ||||| | |
Sbjct 5858 TGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAG-G 5916
Query 108334 CTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATG 108389
||| | | | || || || | |||| ||||| ||||| |||| || ||||||
Sbjct 5917 ATCCCCGAAGTCCCAGGGTCACTGTCCTTAAGCCA---TAAGTACGACATGTCCGACATG 5973
Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449
|| || |||||| | ||||||||||||||| || || || | || ||| ||
Sbjct 5974 CACGCGATTGCCAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCC 6033
Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509
|| || | || ||| || |||| | | || | ||| ||| ||| || || |||
Sbjct 6034 CCCTACCCGCCGTGCAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCGGGTGAC 6093
Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560
|| ||||||| | | || ||| | || || |||||||| ||| ||
Sbjct 6094 TTGAACTGGATGTTGCGCGTGCACCACTTGTTCGCCAACAAGTTCGACACG 6144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346479969984456
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