Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 123 2e-23
seq404197 107 1e-18
>seq366024
Length=42324
Score = 123 bits (136), Expect = 2e-23
Identities = 373/565 (66%), Gaps = 37/565 (7%)
Strand=Plus/Plus
Query 22345 ATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGAT 22404
||||| ||||| || | || || |||||||| | ||| |||||||| ||| | ||
Sbjct 17509 ATGTATAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGACCTTTCCAAGGAC 17568
Query 22405 GTACGCCATTGGACAGAAAAACTGACCGAGGCTGAGCGCAGGT---TCATGTCTCACATA 22461
| | || ||| ||| |||| || ||||| || | |||| || || ||
Sbjct 17569 ATTCAGCACTGG---GAAGCCCTGA---AGCCTGAGGAGAGATATTTCATTTCGCATATT 17622
Query 22462 CTGGCATTCTTTGCAATGGCA---GATGGCATTGTAGGCGACAACCTTGTGT-GCAATTT 22517
||||| ||||||||| ||| |||||||| ||| || ||| | ||| ||| |||
Sbjct 17623 CTGGCTTTCTTTGCA---GCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCAGTTT 17679
Query 22518 CGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAAT 22577
|| || ||| || | ||| | |||||| | ||||||||| || | | || ||
Sbjct 17680 AGCCAA-GAAGTTCAG---ATTACGGAAGCCCGTTGTTTCTATGGCTTCCTAATTGCCAT 17735
Query 22578 GGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAG-- 22635
|||||| || ||| |||||||||||| || || ||| ||| | | ||||||
Sbjct 17736 GGAAAACATCCATTCTGAAATGTATAGTCTCCTCATTGACACTTACAT---TAAAGATTC 17792
Query 22636 --AATCAAGCCGCATTGTTTTCA--GCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGC 22691
|| ||| || | |||| || ||| ||||| ||||| || |||||
Sbjct 17793 CAAAGAAAGGGAATTTCTCTTCAACGCTATTGAGACAATGCCTTGTGTAAAGAAGAAGGC 17852
Query 22692 ACAGTGGGCTGCACAATGGCTGAATGCCACACATA-AGTCTATC---GCAACACGTCTCT 22747
| | ||||| | |||| || ||| | || ||| | | |||| ||
Sbjct 17853 AGATTGGGC----CTTGTGCTGGATCGGGGACAAAGAGGCTACGTATGGAGAACGTTTCG 17908
Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807
| |||||||| || || ||||| || | |||||||| || ||||| | ||||||||||
Sbjct 17909 TAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGC 17968
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
| || ||||| || || || || | | |||||||| || | |||||| | ||||
Sbjct 17969 TCAAAAAACGAGGTCTGATACCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGACG 18028
Query 22868 AAGGTCTACACTGTGACTTTGCTTG 22892
| ||| |||||||||||||||| ||
Sbjct 18029 AGGGTTTACACTGTGACTTTGCCTG 18053
>seq404197
Length=65104
Score = 107 bits (118), Expect = 1e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||| || | |||||||| || || ||||| || | |||||||| || ||||| | |||
Sbjct 52625 CGTGTCGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATA 52684
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||| |||||| | || ||||| || | | |||||||| || | ||||||
Sbjct 52685 TTCTGGCTCAAGAAATGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGC 52744
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
| ||||| ||| |||||||||||||||| | || |||| | || || | |||||
Sbjct 52745 AGAGACGAGGGTTTACACTGTGACTTTGCCTTCCTGATGTTCAAACACCTGCTACACAAA 52804
Query 22921 CC 22922
||
Sbjct 52805 CC 52806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354403859993932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |