Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq411564 95.1 1e-14
seq359707 84.2 2e-11
>seq411564
Length=61085
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || | || ||| | || | ||| | ||||||||||| || ||||| |||||
Sbjct 40442 GCCACCCCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGA 40501
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATC--GGGA 139654
|| |||| |||||| |||||||| || ||| |||| || | ||||| || |||
Sbjct 40502 AATAGTGCGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 40561
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| |||||||| || || ||| || || | | | | ||||| ||||||||
Sbjct 40562 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCC 40621
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| | ||| | |||||||| |||| || || |||| || ||||||
Sbjct 40622 ACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCATA 40672
>seq359707
Length=5412
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTC--ATTGTGCTCGAGTCTTCGAGCTGTTTAC 139625
||||||||||| || ||| | ||||| | |||| | ||||| |||||||| |
Sbjct 2596 GTAGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGTGGCCA--TCTTCCAGCTGTTTGC 2653
Query 139626 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTT 139685
| ||| |||| || | ||||| || || || ||||||||||| || ||| || |
Sbjct 2654 CTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCT 2713
Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745
| | | | | ||||| ||| ||||||||| | ||| | |||||||| ||||| |
Sbjct 2714 TCACGTTCTTGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAGG 2773
Query 139746 TTTTTACGAATATTTGCAT 139764
| || ||||| || |||||
Sbjct 2774 TCTTCACGAAGATCTGCAT 2792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 493450710044800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |