Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq391816 95.1 2e-14
seq147678 95.1 2e-14
seq285322 91.5 3e-13
seq380683 89.7 1e-12
seq354594 89.7 1e-12
seq392833 86.0 1e-11
seq204889 86.0 1e-11
>seq391816
Length=17404
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 12799 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 12740
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 12739 TCCCGGCAGAGA 12728
>seq147678
Length=5304
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2965 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3024
Query 142564 CCCACATCGGGC 142575
||||| ||||||
Sbjct 3025 CCCACGTCGGGC 3036
>seq285322
Length=15752
Score = 91.5 bits (100), Expect = 3e-13
Identities = 73/87 (84%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3049 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3108
Query 142564 CCCACATCGGGCAGAAGTCGCCGTCTT 142590
||||| | |||| || || |||| ||
Sbjct 3109 CCCACGTTGGGC-GAGGTGTCCGTTTT 3134
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 13209 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13150
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 13149 CCCACGTTGGGC 13138
>seq380683
Length=23711
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 22692 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 22633
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 22632 CCCACGTTGGGC 22621
>seq354594
Length=23943
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9755 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9696
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 9695 CCCACGTTGGGC 9684
>seq392833
Length=51891
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct 30865 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCCTTAATCTCAGGGTCGTGGGTTCGAGC 30806
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 30805 CCCACGTTGGGC 30794
>seq204889
Length=6731
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3826 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTTAGGGTCGTGGGTTCGAGC 3885
Query 142564 CCCAC 142568
|||||
Sbjct 3886 CCCAC 3890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1022286736954404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |