Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq391816 95.1 2e-14 seq147678 95.1 2e-14 seq285322 91.5 3e-13 seq380683 89.7 1e-12 seq354594 89.7 1e-12 seq392833 86.0 1e-11 seq204889 86.0 1e-11 >seq391816 Length=17404 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| Sbjct 12799 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 12740 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 12739 TCCCGGCAGAGA 12728 >seq147678 Length=5304 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2965 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3024 Query 142564 CCCACATCGGGC 142575 ||||| |||||| Sbjct 3025 CCCACGTCGGGC 3036 >seq285322 Length=15752 Score = 91.5 bits (100), Expect = 3e-13 Identities = 73/87 (84%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 3049 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3108 Query 142564 CCCACATCGGGCAGAAGTCGCCGTCTT 142590 ||||| | |||| || || |||| || Sbjct 3109 CCCACGTTGGGC-GAGGTGTCCGTTTT 3134 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 13209 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13150 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 13149 CCCACGTTGGGC 13138 >seq380683 Length=23711 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 22692 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 22633 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 22632 CCCACGTTGGGC 22621 >seq354594 Length=23943 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 9755 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9696 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 9695 CCCACGTTGGGC 9684 >seq392833 Length=51891 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| |||| |||||||| |||||||||||||||| Sbjct 30865 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCCTTAATCTCAGGGTCGTGGGTTCGAGC 30806 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 30805 CCCACGTTGGGC 30794 >seq204889 Length=6731 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 3826 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTTAGGGTCGTGGGTTCGAGC 3885 Query 142564 CCCAC 142568 ||||| Sbjct 3886 CCCAC 3890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1022286736954404