Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 167 4e-36
seq404197 161 2e-34
seq418289 87.8 3e-12
>seq366024
Length=42324
Score = 167 bits (184), Expect = 4e-36
Identities = 565/866 (65%), Gaps = 27/866 (3%)
Strand=Plus/Plus
Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351
|||| || || ||| ||||| ||||| || || ||| ||||| || || |||
Sbjct 17492 ACCATGATATTTGGCAGATGTATAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGG 17551
Query 42352 TTGACCTGGCCAAGGACA--CGGCCGGCTGGGAGTCACTGT---CTGAGAACGAAAAGTT 42406
| ||||| ||||||||| | || |||||| | ||| ||||| | || | |
Sbjct 17552 TGGACCTTTCCAAGGACATTCAGCA--CTGGGAAGCCCTGAAGCCTGAGGA-GAGA--TA 17606
Query 42407 TTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCT 42466
|||| | | || ||||| ||||| || || ||| |||||||| ||||| ||| |
Sbjct 17607 TTTCATTTCGCATATTCTGGCTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTT 17666
Query 42467 GGCC-ACCAGGTTCATGAAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTT 42523
|| | ||| || | |||| || ||| ||| || || || || ||||| |||||
Sbjct 17667 GGTGGAGCAGTTT-AGCCAAGAAGTTCAGATTACG--GAAGCCCGTTGTTTCTATGGCTT 17723
Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580
|| || ||||| || ||| | || ||||| |||| | || |||| |||| ||
Sbjct 17724 CCTAATTGCCATGGAAAACATCCATTCTGAAATGTAT---AGTCTCCTCATTGACACTTA 17780
Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640
||| ||| || || | | || ||||| || || ||||| ||||| || |
Sbjct 17781 CATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGCTATTGAGACAATGCCTTGTGT 17840
Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700
||||||||||| || ||||| | |||||||| | || || |||| || ||
Sbjct 17841 AAAGAAGAAGGCAGATTGGGCCTTGTGCTGGATCGGGGACAAAGAGGCTACGTATGGAGA 17900
Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760
| | ||||||||| | || || || || |||||||| || || | || || || ||
Sbjct 17901 ACGTTTCGTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGAT 17960
Query 42761 CTTCTGGCTC-AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819
||||||||| || | |||| | ||| ||||| ||||| || || || ||||| || |
Sbjct 17961 ATTCTGGCTCAAAAAACGAGGTCT-GATACCCGGCCTCACATTTTCCAATGAACTTATTA 18019
Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879
|||| |||||||| | || | |||||||||||||| | ||| | ||||| |
Sbjct 18020 GCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATATTC---AAACACCTGCTAC 18076
Query 42880 ACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939
|||| || ||| || || | ||| || ||| | || || || || |||
Sbjct 18077 ACAAACCTTCGGAGCAGAGAGTCAAATAAATAATCGTCAATGCAGTTAGAATAGAACAGG 18136
Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999
||||||||||| | | ||||| ||| || | || ||||| | | |||
Sbjct 18137 AGTTCCTCACGGATGCCCTGCCAGTGAAGCTCATTGGGATGAATTGCACTTTGATGAAGC 18196
Query 43000 AGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACA 43059
|||||||| | | ||| || ||| || || | || ||||| | ||| | | ||
Sbjct 18197 AGTACATCGAATTCGTGGCAGACAGACTTATGCGGGAGCTGGGTTTTAGCAAGGTTTTCA 18256
Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119
|| || |||||||||||||| || || |||| || ||||| ||||| |
Sbjct 18257 GAGTAGAAAATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCT 18316
Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||| | || | ||| || |||
Sbjct 18317 CTGAGAAGAGAGTAGGCGAGTATCAG 18342
>seq404197
Length=65104
Score = 161 bits (178), Expect = 2e-34
Identities = 465/709 (66%), Gaps = 15/709 (2%)
Strand=Plus/Plus
Query 42443 TGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAG--TACTTT 42500
||||||| |||| ||||| ||||||| || | | |||| || ||| |||
Sbjct 52366 TGACGGCGTAGTAAATGAAAACCTGGTGGAGCGGCTTAGCCAAGAAGTTCAGATTACG-- 52423
Query 42501 GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTAC 42560
|| || | | ||||| |||||||| || ||||| || ||| | || || || ||||
Sbjct 52424 GAAGCCCATTATTTCTATGGCTTCCAAATCGCCATGGAAAACATACATTCGGAAATGTAT 52483
Query 42561 GCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAG 42617
| || |||| |||| ||||| | ||| || || | | || |||||
Sbjct 52484 ---AGTCTCCTCATTGACACTTACATTCAAGATTCCAAAGAAAGGGAATTTCTCTTCAAC 52540
Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677
||||| ||||| ||||| || | ||||||||||| || ||||| | ||||||||||
Sbjct 52541 GCCATTGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATCGAG 52600
Query 42678 AGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTC 42737
|| || | || | | || | | ||||||||| |||| || || || ||||||
Sbjct 52601 GACAAAGAGGCTAGGTACTGAAAGCGTGTCGTAGCCTTTGCCGCAGTGGAAGGAATCTTC 52660
Query 42738 TTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACT 42796
|| || || | || || || || |||||||||||| | ||| | ||||||||| ||
Sbjct 52661 TTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAATGAGGACT-GATGCCCGGCCT 52719
Query 42797 CACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCT 42856
||| || || || ||||| || ||||| |||||||| | || | |||||||||| |||
Sbjct 52720 CACATTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTTCCT 52779
Query 42857 CCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCAC 42916
||||| | ||||| ||||| || ||| || || | ||| | || |||
Sbjct 52780 GATGTTC---AAACACCTGCTACACAAACCTTCGGAGCAGAGAGTCAAAGAAATTATCGT 52836
Query 42917 GGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGG 42976
| || || ||| || |||||||||||||| || | | | | ||| || | ||
Sbjct 52837 CAATGCAGTTAGGATAGAACAGGAGTTCCTCACGGAGGCCCCGACAGTGAAGCTCATTGG 52896
Query 42977 CATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCA 43036
||||| || | ||| |||||||| | | | | || ||| || || |
Sbjct 52897 GATGAATTGCGCTTTGATGAAGCAGTACATCAAATTCCTGGCAGACAGACTTATGCTGGA 52956
Query 43037 GATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTC 43096
| ||||| | ||| | | || || || |||||||||||||| | ||
Sbjct 52957 GCTGGGTTTTAGCAAGGTTTTCAGAGTAGAAAATCCATTTGACTTTATGGAGAATAGTTC 53016
Query 43097 GTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||| || ||||| ||||| || |||||| | || | ||| || |||
Sbjct 53017 ACTGGAAGGGAAGACTAACTTCTTTGAGAAGAGAGTAGGCGAGTATCAG 53065
>seq418289
Length=29330
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
||||||||| |||| || || || |||||||| || || | || || || || ||||||
Sbjct 26669 GTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 26728
Query 42768 CTC-AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
||| || | |||| | ||||||||| ||||| || || || ||||| || ||||| ||
Sbjct 26729 CTCAAAAAACGAGGTCT-GATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 26787
Query 42827 CGAGG 42831
|||||
Sbjct 26788 CGAGG 26792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 939364373877440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |