Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq380682 93.3 5e-14
seq419945 91.5 2e-13
seq324078 89.7 6e-13
seq222990 89.7 6e-13
seq411564 86.0 7e-12
seq393085 84.2 2e-11
>seq380682
Length=18948
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1898 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1957
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 1958 TATACTAACGAGGA 1971
>seq419945
Length=88941
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 56508 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 56567
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 56568 ATACTAACGAGGA 56580
>seq324078
Length=15205
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 10311 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 10252
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 10251 TACTAACGAGGA 10240
>seq222990
Length=16942
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 6157 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 6098
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 6097 TACTAACGAGGA 6086
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct 3564 CTCCCCGTCGGGGAATCGAACGCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3505
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 3504 TACTAACGAGGA 3493
>seq411564
Length=61085
Score = 86.0 bits (94), Expect = 7e-12
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || |||| ||| | |||| |||| || ||| || || || ||||||||||
Sbjct 40443 CCACCCCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAA 40502
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC--GGCTG 42099
| ||| || |||| || ||||| || || || || ||||| | ||||||||| || |
Sbjct 40503 ATAGTGCGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 40562
Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | || ||||| ||| ||| || || | || | ||||| || | ||||
Sbjct 40563 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCA 40622
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| |||||||| || ||||| | ||||| |||||
Sbjct 40623 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 40671
>seq393085
Length=61302
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 60077 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 60136
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 60137 TATACTAACGAGGA 60150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540351127808960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |