Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq364176 111 2e-19
seq411564 109 5e-19
seq258579 107 2e-18
seq418776 96.9 3e-15
seq393589 96.9 3e-15
seq331670 95.1 1e-14
seq336898 93.3 4e-14
seq356745 84.2 2e-11
seq414080 82.4 8e-11
>seq364176
Length=18321
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||| | | ||| | ||| ||||||| || || || |||||| |||||| || |
Sbjct 5338 ACCACCGTGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGA 5397
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | |||||||| |||||
Sbjct 5398 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 5457
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || |||||| || |||||| || || ||
Sbjct 5458 AATTCCTTCCTTATCCTGGATCTTGGCGTTTACATTTTCTGTTGTATCCAAGGGTTCGAC 5517
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | ||| | |||||| || |||| || || |||||||| ||||| ||
Sbjct 5518 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 5568
>seq411564
Length=61085
Score = 109 bits (120), Expect = 5e-19
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || ||||||||||| | | ||||| ||||||| ||||| |||||
Sbjct 40473 GTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTCCAGCTGTTTGCCT 40532
Query 64307 GCATAAATGAGCCGCTGCTGGTC--GGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCT 64364
||| | ||||||| ||||||||| ||| || || ||||| || || || || || ||
Sbjct 40533 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCT 40592
Query 64365 TTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424
| ||| || | || |||| || ||||| || | || | ||||||||| |||| |
Sbjct 40593 TCACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 40652
Query 64425 TTTTTACGAAAATTTGCAT 64443
| || |||| || |||||
Sbjct 40653 TCTTCCCGAAGATCTGCAT 40671
>seq258579
Length=20613
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| | || || ||||||| |||||| || | | | || |
Sbjct 19184 TCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGTCC 19125
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | |||||||| |||||||||||||| ||
Sbjct 19124 ATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 19065
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | || ||| || || || || | ||| |
Sbjct 19064 GTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTGAT 19005
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || |||| || || |||||||| ||||| ||
Sbjct 19004 GGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 18966
>seq418776
Length=96061
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || ||||||||||| | | |||| | ||||| ||||| |||||
Sbjct 55075 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGTTTGCCT 55016
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||| ||| || || || ||||| || || || || || |||
Sbjct 55015 GCAAAGATAAGCCTCTGCTAGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 54956
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| || ||||| || | || | |||||||| ||| ||
Sbjct 54955 ACATTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTGCNNNTCAGGGTC 54896
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 54895 TTCACGAAGATCTGCAT 54879
>seq393589
Length=19132
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/215 (70%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| | || || |||||||||||||| || | | || || |
Sbjct 8059 TCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 8000
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | |||||||| || | ||||||||| ||
Sbjct 7999 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCCTT 7940
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | |||||| || || || | | ||| |
Sbjct 7939 GTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAGTGAT 7880
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442
|||||| || |||| || || | |||||| ||||
Sbjct 7879 GGTCTT-CCTGTCAGGGTCTTCATGAAAATCTGCA 7846
>seq331670
Length=23129
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || ||||||||||| | | ||||| | ||||| | ||| |||||
Sbjct 21986 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGTTTGCCT 22045
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | | ||||| ||||||||| | || || |||||||| || || || || |
Sbjct 22046 GCAAAGAGGAGCCTCTGCTGGTCAGCGGGGATGCCTTCTTTATCCTGGATCTTGGCATCC 22105
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
| || | | | || |||| || ||||| || | || | |||||||| ||||| ||
Sbjct 22106 AGGACATTCTCGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCAGGTCAGGGTC 22165
Query 64427 TTTACGAAAATTTGCAT 64443
|| | ||| || |||||
Sbjct 22166 TTCATGAAGATCTGCAT 22182
>seq336898
Length=33758
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/213 (70%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|| ||||||| || || || |||||||||||||| || | | || || | |||||
Sbjct 29857 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 29798
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| |||||||| ||| | || || |||||||| |||||||||||||| || || ||
Sbjct 29797 AGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 29738
Query 64355 ATTTTTTGCTTTACA-ACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
| || ||||||| || | |||||| || || || || | ||| | || | |
Sbjct 29737 CTCTTGGCCTTTACATTTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGCCAT 29678
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| |||| || || | |||||| ||||| ||
Sbjct 29677 CCCTGTCAGGGTCTTCAAGAAAATCTGCATATT 29645
>seq356745
Length=38052
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/202 (70%), Gaps = 3/202 (1%)
Strand=Plus/Plus
Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTG-CGACGGTGCGCGCGTCTTCAAGCTGCTTGC 64304
||| || || |||||||||||||| || | ||| | || | || || || |||||||
Sbjct 19849 CGTGGACTCCTTTTGAATGTTGTAGTCAGACGAAGTATGGC-CATCCTCCAGTTGCTTGC 19907
Query 64305 CGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCT 64364
| ||| | || || | ||||||| ||||| ||||||||||| || || || || ||
Sbjct 19908 CAGCAAAGATCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCT 19967
Query 64365 TTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424
||||| || | |||||| | || || | | ||| | |||||| || |||| |
Sbjct 19968 TTACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTCAGGG 20026
Query 64425 TTTTTACGAAAATTTGCATTTT 64446
| || | |||||| ||||| ||
Sbjct 20027 TCTTCATGAAAATCTGCATCTT 20048
>seq414080
Length=5684
Score = 82.4 bits (90), Expect = 8e-11
Identities = 98/133 (74%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 64237 TAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAG 64296
|||||||| || || || |||||||||||||| || | || | | ||||| ||
Sbjct 4726 TAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAG 4671
Query 64297 CTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTAT 64356
|||||||| ||| | || || | |||||||| |||||||||||||| || || || ||
Sbjct 4670 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGAT 4611
Query 64357 TTTTTGCTTTACA 64369
|| |||||||
Sbjct 4610 CTTGACCTTTACA 4598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 497012646211360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |