Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 84.2 2e-11
seq364176 82.4 5e-11
>seq258579
Length=20613
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 14961 TCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGC 15020
||| || || | |||||| | || || ||||| | |||||| || | ||| | |
Sbjct 19184 TCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGTCC 19125
Query 15021 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTT 15080
||||| | ||| ||||| || | |||| | || ||||| ||||||||||||||
Sbjct 19124 ATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 19065
Query 15081 GTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140
||| || ||| |||||| ||||||| | ||| ||| || || | || ||
Sbjct 19064 GTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTGAT 19005
Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
||| || || ||||| || || || ||||| ||||||||
Sbjct 19004 GGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 18966
>seq364176
Length=18321
Score = 82.4 bits (90), Expect = 5e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | | ||| || || | |||||| || || || ||||| |||||| ||
Sbjct 5339 CCACCGTGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGAC 5398
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| |||||||| | |||| | || ||||| |||
Sbjct 5399 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 5458
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || || ||| |||||| ||||| | ||||| ||| ||
Sbjct 5459 ATTCCTTCCTTATCCTGGATCTTGGCGTTTACATTTTCTGTTGTATCCAAGGGTTCGACC 5518
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | || ||||| || || ||||| || || || ||||| ||||||||
Sbjct 5519 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 5568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355556310047540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |