Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 143 6e-29
seq364176 131 4e-25
seq393589 127 5e-24
seq336898 120 7e-22
seq359707 107 4e-18
seq411564 105 2e-17
seq397823 105 2e-17
seq414080 104 5e-17
seq168090 104 5e-17
seq418776 100 7e-16
seq356745 95.1 3e-14
seq363762 89.7 1e-12
seq233743 89.7 1e-12
>seq258579
Length=20613
Score = 143 bits (158), Expect = 6e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || |||| ||||||||||| ||||||||||||| |||| | |
Sbjct 19188 GAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATAC 19129
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| || | |||||||| ||| ||||||||
Sbjct 19128 GTCCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 19069
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || ||| | | || | | ||| || || | |
Sbjct 19068 CCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAG 19009
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| ||||| || || ||||| ||||| ||
Sbjct 19008 TGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTG 18972
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 200930 aaaaaCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || ||||| ||||||||||| | | |||| | || |||||||
Sbjct 19090 AAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGACGTATTTTGTCTGACTACAACG 19149
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 201028
| || || ||||| ||||||| ||||| ||||||||||
Sbjct 19150 TTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACTTC 19188
>seq364176
Length=18321
Score = 131 bits (144), Expect = 4e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||| |
Sbjct 5346 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTAC 5405
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| || | |||||||| ||| ||||||||
Sbjct 5406 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 5465
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| || || ||| || || | ||| || || | |
Sbjct 5466 CCTTATCCTGGATCTTGGCGTTTACATTTTCTGTTGTATCCAAGGGTTCGACCTCGAGAG 5525
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| ||||| || || ||||| ||||| ||
Sbjct 5526 TGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTG 5562
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 200930 aaaaaCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || ||||| ||||||||||| | |||||| | || |||||
Sbjct 5444 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCACAACA 5385
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 201028
|| || ||||| |||||||| ||||| ||||||||||
Sbjct 5384 CTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTC 5346
>seq393589
Length=19132
Score = 127 bits (140), Expect = 5e-24
Identities = 159/217 (73%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || |||| ||||||||||| | ||||||||||| |||||| |
Sbjct 8063 GAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 8004
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| || | |||||||| || |||||||||
Sbjct 8003 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTT 7944
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || ||| | || || | ||| || | | |
Sbjct 7943 CCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAG 7884
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| || || || || |||| ||||| ||
Sbjct 7883 TGATGGTCTT-CCTGTCAGGGTCTTCATGAAAATCTG 7848
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 200930 aaaaaCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || ||||| ||||||||||| | |||||| | || ||||||
Sbjct 7965 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 8024
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 201028
| || || ||||| ||||||| ||||| ||||||||||
Sbjct 8025 TTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACTTC 8063
>seq336898
Length=33758
Score = 120 bits (132), Expect = 7e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| |
Sbjct 29868 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 29809
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| || |||||||| ||| ||||||||
Sbjct 29808 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAGGAATTCCTT 29749
Query 199530 C 199530
|
Sbjct 29748 C 29748
Score = 93.3 bits (102), Expect = 1e-13
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 200930 aaaaaCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || ||||| ||||||||||| | |||||| | || ||||||
Sbjct 29770 AAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 29829
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 201028
| || || |||||||||||||| ||||| |||||||||
Sbjct 29830 TTCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACTTC 29868
>seq359707
Length=5412
Score = 107 bits (118), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || || ||||| || |||| | |||| |||| ||| ||||||
Sbjct 2581 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGTGGCCATCT 2640
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || |||||||| | ||||||||| || || |||||| |||
Sbjct 2641 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 2700
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| | || |||||| | | || || |||| ||||| |||
Sbjct 2701 TGGATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTC 2760
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || || | || ||||| || || || ||||||
Sbjct 2761 TTGCCAGTCAAGGTCTTCACGAAGATCTG---CATTTT 2795
>seq411564
Length=61085
Score = 105 bits (116), Expect = 2e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || || ||||| || |||| |||||| |||| | ||| | || |||
Sbjct 40458 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCT 40517
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC--CGGAAAAATTCCTTCTCGCT 199535
|||||||| || || || |||||||| | ||||||||| || || ||||| |
Sbjct 40518 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTAT 40577
Query 199536 CCTGAATCTTTTGCTTCACGGATTC--GACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|||| ||||| |||||| |||| || |||||| | | || || |||| |||||
Sbjct 40578 CCTGGATCTTGGCCTTCAC--ATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 40635
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||| | || || ||
Sbjct 40636 GGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTG 40668
>seq397823
Length=5921
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| | ||| || ||||| ||||||||||| ||||||||||| ||||||
Sbjct 1673 CGAAGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGACTGTTGTAGTCAGACAAAGTA 1732
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| ||||| || || || || | | ||||||| | | |||| ||
Sbjct 1733 CGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAATCCTTGCTGGTTAGAAGGAATTACT 1792
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| || || ||| || || | | ||| || || |
Sbjct 1793 TCCTTATCTTGGATCTTGGCGTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGA 1852
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || | ||||||||||| ||
Sbjct 1853 GTGATGGTCTTCCCTGTCAGGATCTTCACAAAAATCTG 1890
>seq414080
Length=5684
Score = 104 bits (114), Expect = 5e-17
Identities = 108/140 (77%), Gaps = 9/140 (6%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACA---AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA 199465
|||||||||| ||| || || ||||| ||||||||||| | |||||||||| ||
Sbjct 4741 CGAAGTCTCA--ACATTTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA----AA 4688
Query 199466 GTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATT 199525
|| | |||||||||||| ||||| || || ||||| || | |||||||| ||| ||||
Sbjct 4687 GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATT 4628
Query 199526 CCTTCTCGCTCCTGAATCTT 199545
||||| ||||| |||||
Sbjct 4627 CCTTCCTTATCCTGGATCTT 4608
>seq168090
Length=9538
Score = 104 bits (114), Expect = 5e-17
Identities = 169/237 (71%), Gaps = 11/237 (5%)
Strand=Plus/Plus
Query 199397 TAAAATATTT----ATCGAAGT-CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGT 199451
||||||||| ||| |||| | |||||| |||| || |||||||| || |||| ||
Sbjct 8474 TAAAATATTGTCTGATC-AAGTGCCCAGGACCTGGTGCAGGGTCGACTCTTTCTGGATGT 8532
Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511
||| |||| | ||| ||||||||||| ||||| || || |||||||| | |||||
Sbjct 8533 TGTGATCAGAAAGAGTGTGGCCATCTTCCAGATGCTTGCCTGCAAAGATGAGCCTCTGCT 8592
Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTC--GACGGTGTC 199569
|| ||| | || ||||| ||||| ||||| |||||| |||| || | ||||
Sbjct 8593 -GTTCGGGAGGATGCCTTCCTCATCCTGGATCTTGGCCTTCAC--ATTCCTGATGATGTC 8649
Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| | ||||| |||| ||||| ||||| | || | || ||||| || |||||
Sbjct 8650 ACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGTCAACGTCTTCACGAAGATTTG 8706
>seq418776
Length=96061
Score = 100 bits (110), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| | || ||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 55090 AGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCT 55031
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| || | ||||| ||| || || ||||| |||
Sbjct 55030 TCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGGATGCCTTCCTTATCC 54971
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 54970 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTC 54911
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| | | || || ||||| || || ||
Sbjct 54910 TTGCNNNTCAGGGTCTTCACGAAGATCTG 54882
>seq356745
Length=38052
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 1/194 (1%)
Strand=Plus/Plus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
|| ||||||||||| | ||||||||||| | |||| ||||| ||||| ||||| ||
Sbjct 19850 GTGGACTCCTTTTGAATGTTGTAGTCAGACGAAGTATGGCCATCCTCCAGTTGCTTGCCA 19909
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
|| ||||| || | ||||||| ||| ||||||||| ||||| ||||| |||
Sbjct 19910 GCAAAGATCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCTTT 19969
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612
|| ||| | || |||| | ||| || | | ||||| ||||| || || || ||
Sbjct 19970 ACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTCAGGGTC 20028
Query 199613 TTCACAAAAATTTG 199626
|||| ||||| ||
Sbjct 20029 TTCATGAAAATCTG 20042
>seq363762
Length=31867
Score = 89.7 bits (98), Expect = 1e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||| | ||||||||||| |||||| | |||||||||||| ||||| || || ||||
Sbjct 10316 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 10375
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || | |||||||| ||| |||||||
Sbjct 10376 TCAGTCTTTGCTGGTCAGGAGGAATTCCT 10404
>seq233743
Length=26381
Score = 89.7 bits (98), Expect = 1e-12
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| | |||| |||| | ||| | || |||
Sbjct 21229 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGCTGTAATCAGAAAGAGTGCGGCCGTCT 21170
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || |||||||| | |||||| || || || |||||| |||
Sbjct 21169 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGGGGGATGCCTTCTTTATCC 21110
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
| |||||| ||||| | | || ||||||
Sbjct 21109 TCAATCTTGGCCTTCATGTTCTTGATGGTGTC 21078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1172555716616748
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