Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 289 3e-73
seq404197 271 8e-68
seq359707 109 5e-19
seq411564 105 7e-18
seq418776 89.7 5e-13
seq331670 89.7 5e-13
seq233743 86.0 6e-12
>seq366024
Length=42324
Score = 289 bits (320), Expect = 3e-73
Identities = 641/954 (67%), Gaps = 17/954 (2%)
Strand=Plus/Minus
Query 132550 TAAAAGTCCGCATCCAAAGTAAAGGTGTCGTCCTTGGCAAAC-----ATCACGCCAAATT 132604
|| ||||| |||||||| ||||||| | || || || || ||||| | |
Sbjct 18401 TAGAAGTCAGCATCCAAGGTAAAGGAATTCTC--TGTCAGACTGGACATCACTCTCATCC 18344
Query 132605 TTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCG 132664
| ||||| ||||| || | |||||| | || ||||| || || |||| ||||| |
Sbjct 18343 TCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 18284
Query 132665 TCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCA 132724
|||||| || || || || || || | |||| | ||| || | |
Sbjct 18283 CCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCCGCATAA 18224
Query 132725 GCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGAC 132784
| ||||| |||||||| |||||||| ||| ||| |||||| | || | ||
Sbjct 18223 GTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAAAGTGCAATTCATCCCAATGAGCT 18164
Query 132785 GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844
||| ||||| || || ||||| || || || || || || | | || ||||
Sbjct 18163 TCACTGGCAGGGCATCCGTGAGGAACTCCTGTTCTATTCTAACTGCATTGACGATTATTT 18104
Query 132845 CCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGT 132904
| || | | | | || || | || || ||||| |||| ||| |||||||
Sbjct 18103 ATTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAATATCAGGCAGGCAAAGT 18044
Query 132905 CGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGA 132964
| || || || |||||||| ||| ||| ||||| ||| || || | |||||| || |
Sbjct 18043 CACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGTATCA 17984
Query 132965 GGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGA 133024
| || |||||||||||||| ||||| | || ||| || |||||||||| || || |
Sbjct 17983 GACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCA 17924
Query 133025 CGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCA 133084
| || || || || || | || || || |||| || |||||| ||||||||| ||
Sbjct 17923 CTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCTCTTTGTCCCCGATCCAGCACA 17864
Query 133085 GCGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGG 133143
||||| || ||||| |||||| || || ||||| || || || ||||| || | |
Sbjct 17863 AGGCCCAATCTGCCTTCTTCTTT-ACACAAGGCATTGTCTCAATAGCGTTGAAGAGA--- 17808
Query 133144 AGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAG 133200
| || | ||| |||| | ||| ||||| |||||| ||||||||| ||
Sbjct 17807 AATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAA 17748
Query 133201 TGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACT 133260
|| | ||| |||||||| ||| | ||||| || || || || || || | ||| |||
Sbjct 17747 TGGATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACT 17688
Query 133261 TCTTGAGCGAAAC-GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAA 133319
||||| || |||| |||| |||| ||||| || || ||||| || || || || || ||
Sbjct 17687 TCTTG-GCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAA 17629
Query 133320 GGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGT 133379
||||| | ||| ||||||| | ||| | |||| | ||||||| | |
Sbjct 17628 AGCCAGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAAT 17569
Query 133380 GTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
||||||||| ||||||||||| || | |||||||| || ||||| ||||| || |||||
Sbjct 17568 GTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACAT 17509
Query 133440 ACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493
||| || || |||| || ||||| || ||||| ||||||| ||||||
Sbjct 17508 CTGCCAAATATCATGGTATTTGATAGGAAAGATGACAAAGCGGCGGGTGTTTTC 17455
>seq404197
Length=65104
Score = 271 bits (300), Expect = 8e-68
Identities = 638/954 (67%), Gaps = 23/954 (2%)
Strand=Plus/Minus
Query 132550 TAAAAGTCCGCATCCAAAGTAAAGG-------TGTCGTCCTTGGCAAACATCACGCCAAA 132602
|| ||||| |||||||| ||||||| ||||| || | ||||||| || |
Sbjct 53124 TAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGG----ACATCACTCCCAT 53069
Query 132603 TTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAG 132662
| ||||| ||||| || | |||||||| || ||||| || || |||| ||| |
Sbjct 53068 CCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAACTATT 53009
Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAG 132722
| |||||| || || || || || || | |||| | ||| || | |
Sbjct 53008 CTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCAGCAT 52949
Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAG 132782
|| ||||| |||| ||| | |||||| ||| ||| ||||||| | || | ||
Sbjct 52948 AAGTCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCGCAATTCATCCCAATGAG 52889
Query 132783 ACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT 132842
||| | | | || || ||||| || || || || || || | | || ||
Sbjct 52888 CTTCACTGTCGGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACTGCATTGACGATAAT 52829
Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAA 132902
||| | || | | | | || || | || || |||||||||| | | |||||
Sbjct 52828 TTCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCAGGAAGGCAAA 52769
Query 132903 GTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCAT 132962
||| || || || |||||||| ||| ||| ||||| ||| || || | |||||||||
Sbjct 52768 GTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCAT 52709
Query 132963 GAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTC 133022
|| || | ||| |||||||| ||||| | || ||| || |||||||||| || ||
Sbjct 52708 CAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTC 52649
Query 133023 GACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCG 133082
|| || || || || || | |||| | | || | || |||||| ||||||||||
Sbjct 52648 CACTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGCCTCTTTGTCCTCGATCCAGCG 52589
Query 133083 CAGCGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAAC 133141
|| ||||| || ||||| |||||| || || ||||| || || |||||||| || |
Sbjct 52588 CAAGGCCCAATCTGCCTTCTTCTTT-ACACAAGGCATTGTCTCAATGGCGTTGAAGA--- 52533
Query 133142 GGAGTTTCTCTTCCGAGGAA---CGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198
| | || | ||| |||| | | ||| ||||| |||||| |||||||||||
Sbjct 52532 GAAATTCCCTTTCTTTGGAATCTTGAATGTAAGTGTCAATGAGGAGACTATACATTTCCG 52473
Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258
| |||| ||| |||||||||||||| ||||| || || | | || || | ||| |
Sbjct 52472 AATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAATAATGGGCTTCCGTAATCTGAA 52413
Query 133259 CTTCTTGAGCGAA-ACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC-GAA 133316
||||||| || || ||||| ||||| ||||| || || | |||||| || || || ||
Sbjct 52412 CTTCTTG-GCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCGTCACTTGCTGCAGAG 52354
Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCG 133376
||||| ||| || ||| |||||| | ||| | |||| | |||| || |
Sbjct 52353 AAAGG-CAGGACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCGGTGCTG 52295
Query 133377 CGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436
|||||||||| |||||||||||||| | ||||| || || ||||| || || || |
Sbjct 52294 AATGTCCTTGGAAAGGTCCACCTCCTCAGCCGTCCAGAAGGAAGCCTCAGCGTTCTTACA 52235
Query 133437 CATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTT 133490
||| ||| || || ||| || ||||| | ||| | |||||||||||
Sbjct 52234 CATCTGCCAAATATCACGGTATCCGATAGGAAAGAAGACAGAGCGGCGGGGGTT 52181
>seq359707
Length=5412
Score = 109 bits (120), Expect = 5e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || | || ||||| ||||||||| | || || ||| ||
Sbjct 2795 AAAATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGTCC 2736
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||| | | | |||| | || | || |||| || ||||| || || ||| | ||
Sbjct 2735 AGTGACACCATCAAGAACG-TGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGA 2677
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||| ||||||| | || |||||||||||||| || | | ||| | || ||
Sbjct 2676 CCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCACACTCCTTCTGATTA 2617
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|| |||||| || || | || ||||| |||| || ||| |||| || |||
Sbjct 2616 CAGCATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 2565
>seq411564
Length=61085
Score = 105 bits (116), Expect = 7e-18
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || |||| || || || |||||||| ||||||||| | || || ||| |||
Sbjct 40671 ATGCAGATCTTCGGGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 40612
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC--GACC 38361
|||| | | | | | || | || |||| || || || || || ||| || ||||
Sbjct 40611 GACACCATCAAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCCCCGACC 40552
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||| ||||||| | || |||||||||||||| |||| ||||| | || ||||
Sbjct 40551 AGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGACGGCCGCACTATTTCTGATTACA 40492
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| || || | || ||||| |||| || ||| | || || |||
Sbjct 40491 ACATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTAAGGGGTGGC 40442
>seq418776
Length=96061
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || | |||| ||||||||| | || || ||| |||
Sbjct 54879 ATGCAGATCTTCGTGAAGACCCTGANNNGCAAGACCATCACCCTGGAGGTGGAGTCCAGT 54938
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| || || || || || ||| | ||| |
Sbjct 54939 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACTAG 54998
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || |||||||||||||| || | |||| || || ||||||
Sbjct 54999 CAGAGGCTTATCTTTGCAGGCAAACAGCTGGAAGATGGCTGCACTCTTTCTGATTACAAC 55058
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| || || | || |||| |||| || ||| |||| || |||
Sbjct 55059 ATCCAGAAAGAGTCAACATTGCACCTGGTCCTCCGTCTGAGGGGTGGC 55106
>seq331670
Length=23129
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||| | || || || || |||| ||||||||| | || || ||| |||
Sbjct 22182 ATGCAGATCTTCATGAAGACCCTGACCTGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 22123
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| || | | || | | || |||| || ||||| || || ||||| |||||
Sbjct 22122 GACACCGAGAATGTCCTGGATGCCAAGATCCAGGATAAAGAAGGCATCCCCGCTGACCAG 22063
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| ||||| | | || ||||||||| |||| || | ||||| || || ||||||
Sbjct 22062 CAGAGGCTCCTCTTTGCAGGCAAACAGATGGAAGATGGCCGCACTCTTTCTGATTACAAC 22003
Query 38424 ATCCAAAAGGAAGCGAC 38440
||||| || || ||||
Sbjct 22002 ATCCAGAAAGAGTCGAC 21986
>seq233743
Length=26381
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
|| ||||| || || ||| | || || ||| ||||||| | || ||||||||||||||
Sbjct 21111 GATAAAGAAGGCATCCCCCCTGATCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAA 21170
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||| || || |||| |||||| || || |||| ||||| |||| ||
Sbjct 21171 GACGGCCGCACTCTTTCTGATTACAGCATCCAGAAAGAGTCGACCCTGCACCTGGTCCTC 21230
Query 38457 CGTTTGAGAGGCGGC 38471
||| |||| || |||
Sbjct 21231 CGTCTGAGGGGTGGC 21245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 497537864680960
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