Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq408094 109 2e-18 seq258579 105 3e-17 seq264139 102 3e-16 seq364176 100 1e-15 seq397823 96.9 1e-14 seq336898 89.7 2e-12 seq332392 87.8 7e-12 seq393589 86.0 2e-11 seq320903 86.0 2e-11 >seq408094 Length=34016 Score = 109 bits (120), Expect = 2e-18 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 15915 GTTACTCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 15856 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| || |||||| | |||| || ||||| || Sbjct 15855 AAAGATGCTGGAACTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCC 15803 >seq258579 Length=20613 Score = 105 bits (116), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || |||||||| || ||| | || Sbjct 18969 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTTGAGGTCGAACCCTCG 19028 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 ||| || ||| | | || || || || || |||||||||||||||||||| || Sbjct 19029 GATGCAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 19088 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || |||| || ||||| ||||||||| | | |||| | || || || Sbjct 19089 CAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGACGTATTTTGTCTGACTACAAC 19148 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | | ||||| | || || ||||| Sbjct 19149 GTTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 19186 >seq264139 Length=16387 Score = 102 bits (112), Expect = 3e-16 Identities = 273/410 (67%), Gaps = 13/410 (3%) Strand=Plus/Plus Query 452090 ACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGA 452149 || ||||| || |||||| |||||| ||||||||| | |||||| | || || | Sbjct 3 ACTCCTCTTTCCCTTGGAAATGAAACTGCTGGTGGAGTCATGACTGTCCTCATCAAGTGC 62 Query 452150 GGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAAC 452207 | || | ||||| || ||| || || || | || | | | | ||||| | Sbjct 63 AGCACCACCATTCCCACCAAGCAGACGCAGACCTTCACAAC--CTACTCGGTCAACCAGC 120 Query 452208 CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAAC 452267 | ||||| ||||| || | |||||| || ||||| ||||| ||||| || | Sbjct 121 CCAGTGTACTCATTCAGGTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTGC 180 Query 452268 TAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAA-----GGGGAACTCCTCAAAT 452322 | || | ||| || || |||| |||||| || | || |||||| || Sbjct 181 TTGGCAAGTTTGAACTCACAGACATACCTCCTGCCCCGCCCCCCGTGGTGTTCCTCAGAT 240 Query 452323 TGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAA-AT 452381 |||| | || | |||| ||||||| |||| || || ||||| |||| || | || | Sbjct 241 TGAAGTCACTTTTGATATTGATGCCAATGCCATCCTCAATGTCTGTGCTGTGAATAAGAG 300 Query 452382 CATCTGGAAAATCAGAAAAA-ATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAA 452440 || | |||||| |||| || ||||| || ||||||||||| |||||| || ||| Sbjct 301 CA-CAGGAAAAG-AGAACAAGATTACCATCACTAATGATAAGGGCCGTTTGAGCAAGGAA 358 Query 452441 GATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 || |||||| ||||| | |||||||| || | ||| | ||| ||||| Sbjct 359 GACATTGAACGCATGGTTCAGGAAGCAGAGAAGTACAAAGCTGAAGATGA 408 >seq364176 Length=18321 Score = 100 bits (110), Expect = 1e-15 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || ||| | | Sbjct 5565 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTTG 5506 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | | || || || || ||||||||||||||||||||||| || Sbjct 5505 GATACAACAGAAAATGTAAACGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 5446 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || | || Sbjct 5445 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCACAAC 5386 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 | | | ||||| | || ||||| | || || ||||| Sbjct 5385 ACTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 5348 >seq397823 Length=5921 Score = 96.9 bits (106), Expect = 1e-14 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || | ||||| || || || || ||||| || || ||| | || Sbjct 1893 ATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 1834 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | | || || || ||||||||||||| ||||||| || | || Sbjct 1833 GATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCAG 1774 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || ||||| | || || ||||| ||||||||| | |||||| | || || || Sbjct 1773 CAAGGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 1714 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 | | | ||||| | || ||||| Sbjct 1713 AGTCAAAAGGAGTCCACTCTTCA 1691 >seq336898 Length=33758 Score = 89.7 bits (98), Expect = 2e-12 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | || || ||||| || | | || ||||| || |||||| | || Sbjct 29648 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCG 29707 Query 391110 GATAACATTGAAGCTATTAAACAAAAA-ATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || ||| |||| || | || || |||||||||||||||||||| || Sbjct 29708 GATACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 29767 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || | || || ||||| ||||||||| | |||||| | || || || Sbjct 29768 GCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 29827 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | ||| | ||||| Sbjct 29828 CATTCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACT 29866 >seq332392 Length=48326 Score = 87.8 bits (96), Expect = 7e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| ||||| | ||||||||||| Sbjct 9284 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 9225 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 9224 ACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 9184 >seq393589 Length=19132 Score = 86.0 bits (94), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||| | || || ||||| || || || || ||||| | |||||| | | |||| Sbjct 7851 ATTTTCATGAAGACCCTGACAGG-AAGACCATCACTCTCAAGGTTGAACCCTTGGATACA 7909 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || ||| | | || || || || || |||||||||||| | ||||| || ||| | Sbjct 7910 ATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGCAAAGA 7969 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || | || || ||||| ||||||||| | |||||| | || || || ||| | Sbjct 7970 CTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAA 8029 Query 391236 AAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||||| | | ||||| | || || ||||| Sbjct 8030 AAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 8061 >seq320903 Length=30793 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 420809 TAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACA 420868 |||||| ||||||| ||| ||||| || | | | | || |||||||||||| || || | Sbjct 16034 TAAATAAAACAGTTCTTGCTGGCATGTTAATATCCATAGCAAAAGTTTCAGTGGCAAAAA 15975 Query 420869 AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTA 420928 | | || || ||| || ||| | |||||||| | | ||||||| |||||||||| || Sbjct 15974 AGGCCTTTATCAATCCTTCGGAAAAGAGAATTTCTATAGTTTCTTTCAAAATAGGAAGTA 15915 Query 420929 TACCA 420933 |||| Sbjct 15914 AACCA 15910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1965050012099952