Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq408094 109 2e-18
seq258579 105 3e-17
seq264139 102 3e-16
seq364176 100 1e-15
seq397823 96.9 1e-14
seq336898 89.7 2e-12
seq332392 87.8 7e-12
seq393589 86.0 2e-11
seq320903 86.0 2e-11
>seq408094
Length=34016
Score = 109 bits (120), Expect = 2e-18
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| ||||||| ||||||| || || |||||||||||||| ||||| || |||||
Sbjct 15915 GTTACTCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 15856
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
|||||||| ||| ||||||||| || |||||| | |||| || ||||| ||
Sbjct 15855 AAAGATGCTGGAACTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCC 15803
>seq258579
Length=20613
Score = 105 bits (116), Expect = 3e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || |||||||| || ||| | ||
Sbjct 18969 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTTGAGGTCGAACCCTCG 19028
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
||| || ||| | | || || || || || |||||||||||||||||||| ||
Sbjct 19029 GATGCAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 19088
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || |||| || ||||| ||||||||| | | |||| | || || ||
Sbjct 19089 CAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGACGTATTTTGTCTGACTACAAC 19148
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
|| | ||||| | | ||||| | || || |||||
Sbjct 19149 GTTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 19186
>seq264139
Length=16387
Score = 102 bits (112), Expect = 3e-16
Identities = 273/410 (67%), Gaps = 13/410 (3%)
Strand=Plus/Plus
Query 452090 ACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGA 452149
|| ||||| || |||||| |||||| ||||||||| | |||||| | || || |
Sbjct 3 ACTCCTCTTTCCCTTGGAAATGAAACTGCTGGTGGAGTCATGACTGTCCTCATCAAGTGC 62
Query 452150 GGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAAC 452207
| || | ||||| || ||| || || || | || | | | | ||||| |
Sbjct 63 AGCACCACCATTCCCACCAAGCAGACGCAGACCTTCACAAC--CTACTCGGTCAACCAGC 120
Query 452208 CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAAC 452267
| ||||| ||||| || | |||||| || ||||| ||||| ||||| || |
Sbjct 121 CCAGTGTACTCATTCAGGTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTGC 180
Query 452268 TAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAA-----GGGGAACTCCTCAAAT 452322
| || | ||| || || |||| |||||| || | || |||||| ||
Sbjct 181 TTGGCAAGTTTGAACTCACAGACATACCTCCTGCCCCGCCCCCCGTGGTGTTCCTCAGAT 240
Query 452323 TGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAA-AT 452381
|||| | || | |||| ||||||| |||| || || ||||| |||| || | || |
Sbjct 241 TGAAGTCACTTTTGATATTGATGCCAATGCCATCCTCAATGTCTGTGCTGTGAATAAGAG 300
Query 452382 CATCTGGAAAATCAGAAAAA-ATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAA 452440
|| | |||||| |||| || ||||| || ||||||||||| |||||| || |||
Sbjct 301 CA-CAGGAAAAG-AGAACAAGATTACCATCACTAATGATAAGGGCCGTTTGAGCAAGGAA 358
Query 452441 GATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490
|| |||||| ||||| | |||||||| || | ||| | ||| |||||
Sbjct 359 GACATTGAACGCATGGTTCAGGAAGCAGAGAAGTACAAAGCTGAAGATGA 408
>seq364176
Length=18321
Score = 100 bits (110), Expect = 1e-15
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || ||||| || || ||| | |
Sbjct 5565 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTTG 5506
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| | ||| | | || || || || ||||||||||||||||||||||| ||
Sbjct 5505 GATACAACAGAAAATGTAAACGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 5446
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || | || || ||||| ||||||||| | |||||| | || | ||
Sbjct 5445 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCACAAC 5386
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
| | | ||||| | || ||||| | || || |||||
Sbjct 5385 ACTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 5348
>seq397823
Length=5921
Score = 96.9 bits (106), Expect = 1e-14
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || || | ||||| || || || || ||||| || || ||| | ||
Sbjct 1893 ATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 1834
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| | ||| | | || || || ||||||||||||| ||||||| || | ||
Sbjct 1833 GATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCAG 1774
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | || ||||| | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 1773 CAAGGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 1714
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
| | | ||||| | || |||||
Sbjct 1713 AGTCAAAAGGAGTCCACTCTTCA 1691
>seq336898
Length=33758
Score = 89.7 bits (98), Expect = 2e-12
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| | || || ||||| || | | || ||||| || |||||| | ||
Sbjct 29648 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCG 29707
Query 391110 GATAACATTGAAGCTATTAAACAAAAA-ATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| || ||| |||| || | || || |||||||||||||||||||| ||
Sbjct 29708 GATACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 29767
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 29768 GCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 29827
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | ||| | |||||
Sbjct 29828 CATTCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACT 29866
>seq332392
Length=48326
Score = 87.8 bits (96), Expect = 7e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426
|| ||||| ||||| || || || |||| ||||||| ||||| | |||||||||||
Sbjct 9284 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 9225
Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467
||||| |||||||| || ||||| |||| |||||| ||||
Sbjct 9224 ACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 9184
>seq393589
Length=19132
Score = 86.0 bits (94), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115
|||||| | || || ||||| || || || || ||||| | |||||| | | ||||
Sbjct 7851 ATTTTCATGAAGACCCTGACAGG-AAGACCATCACTCTCAAGGTTGAACCCTTGGATACA 7909
Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175
|| ||| | | || || || || || |||||||||||| | ||||| || ||| |
Sbjct 7910 ATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGCAAAGA 7969
Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235
| || || | || || ||||| ||||||||| | |||||| | || || || ||| |
Sbjct 7970 CTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAA 8029
Query 391236 AAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||||| | | ||||| | || || |||||
Sbjct 8030 AAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 8061
>seq320903
Length=30793
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 420809 TAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACA 420868
|||||| ||||||| ||| ||||| || | | | | || |||||||||||| || || |
Sbjct 16034 TAAATAAAACAGTTCTTGCTGGCATGTTAATATCCATAGCAAAAGTTTCAGTGGCAAAAA 15975
Query 420869 AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTA 420928
| | || || ||| || ||| | |||||||| | | ||||||| |||||||||| ||
Sbjct 15974 AGGCCTTTATCAATCCTTCGGAAAAGAGAATTTCTATAGTTTCTTTCAAAATAGGAAGTA 15915
Query 420929 TACCA 420933
||||
Sbjct 15914 AACCA 15910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1965050012099952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |