Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq319347 248 7e-60
seq415575 104 2e-16
seq394555 104 2e-16
seq361425 102 6e-16
>seq319347
Length=14646
Score = 248 bits (274), Expect = 7e-60
Identities = 955/1488 (64%), Gaps = 39/1488 (3%)
Strand=Plus/Minus
Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309
||||| || |||| ||||| || || ||||||||||| | |||||| |||||||||||
Sbjct 9495 TTATCTGCAGCAGAGACATTGAGGATGCCATTGGCATCAATATCAAAAGTGACTTCAATA 9436
Query 517310 TGAGGGACCCCTCTC-TGAG--------CAGGTGGGATCCCTTCCAAATTAAATGTTCCC 517360
||||| || || | || | |||| || || ||| | | ||| | ||
Sbjct 9435 TGAGGAACACCACGGGTGGGGGGGCCGGCAGGAGGTATGCCTGTGAGTTCAAACTTGCCA 9376
Query 517361 AGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTA 517418
|| || ||||| || || | | ||||| || ||| || || |||| |||
Sbjct 9375 AGCAGGTTGTTATCCTTGGTCATGGCATGCTCACCTTCATAAACCTGAATGAGTACACTG 9316
Query 517419 CAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTG 517477
| || || || || || |||||||| |||| || | || ||||| || |||
Sbjct 9315 --GGCTGGTTGTCCGAGTAGGTTGTAAAGG-TCTGCATCTGCTTGGTGGGAATGGTGGTG 9259
Query 517478 TTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGA 517537
|| | | || | ||||| | ||||| || ||||| | ||||| |||||||||
Sbjct 9258 TTGCACTTGATGAGGACAGTCATGACTCCACCAGCAGTTTCAATTCCAAGGGAAAGAGGA 9199
Query 517538 GTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCT 517597
|||||||| | || | | | ||||| |||||| | | ||| ||||| |||
Sbjct 9198 GTGACATCCAACAGCAGCAAGTCTTGAACATTTTCAGATTTGTCTCCAGATAGAATGGCT 9139
Query 517598 GCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTT 517657
|| || | ||| |||||||| |||||||| || ||||| || | | | ||| |||| |
Sbjct 9138 GCCTGGACAGCTGCACCATAAGCAACAGCCTCGTCAGGGTTGATGCTCTTATTCAGTTCT 9079
Query 517658 TTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCC 517716
|| || ||||| | | ||||||| ||| | ||| || || || | ||| || ||
Sbjct 9078 TTCCCGTTGAAGGAGTCCTGTAGAAGTT-TCTGAATCTTGGGGATGCGGGTTGAACCACC 9020
Query 517717 AACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAA--CTTTT 517774
|| | | ||| ||||| | ||| || || || || || | |||| ||| ||||
Sbjct 9019 CACCAGGAGAATATCATGTATCTGAGACTTGTCTAGCTTGGCATCCCCCAAAGGGCTTTC 8960
Query 517775 TCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTA 517834
|| || || || || | | |||| ||| | | |||||||| ||| || |
Sbjct 8959 TCCACAGGGTCCAGTGTGCCACGGAACAGGTCAGCATTCAGTTCTTCAAATCAGGCACGG 8900
Query 517835 GTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA 517894
|||| | | || | || |||||||| | | |||||| ||||| | | ||
Sbjct 8899 GTAATTGAGGTATAGAAGTCGATTCCTTCATAGAGGAAATCAATCTCAATACTGGCCTGG 8840
Query 517895 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC- 517953
| ||||| || | || |||||||| ||||| || || | || || | ||
Sbjct 8839 ATGCTGGAAGAGAGAGTGCGCTTAGCACGCTCACAAGCAGTACGAAGGTGACGGACAGCC 8780
Query 517954 ---TTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCA 518010
|||| || | |||| || | || | || |||||| ||| ||| | | |
Sbjct 8779 CTCTTTTTCTCACTGATG----TCCTTCTTGTGCTTGTGCTTGAATTCTGCAATAAA--A 8726
Query 518011 TGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAAT--------TTAGTATTTCCTG 518060
|| | || | | || ||||| ||||| || || || | |||| ||| |
Sbjct 8725 TGGTTGACCATCTGGTTGTCAAAGTCTTCTCCACCTAAGCAGAGAAGTGGGTATCTCCAG 8666
Query 518061 ACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTC 518120
|||| ||| || | || | |||| | |||| || | | | |||||| || |
Sbjct 8665 CTGTAGATCTGACCTCAAAGATTCCACCCTCAATAGTGAGGACTGACACATCAAAAGTGC 8606
Query 518121 CACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCAT 518180
||||||| | |||||| || || ||||| ||||| | ||||| || | ||||
Sbjct 8605 CACCACCTAAATCAAAGATCAGCACATTTCTTTCTGCTCCAACCTTTTTGTCTAAGCCAT 8546
Query 518181 ACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTC 518240
| |||| |||||| ||||||||||| || || |||| | ||||| || ||||||||
Sbjct 8545 AGGCAATAGCAGCTGCAGTTGGTTCGTTGATGATTCGAAGTACATTGAGCCCAGCAATAG 8486
Query 518241 TTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAA 518300
|||| |||||||| || || || | || ||||| ||||| || | || || || | ||
Sbjct 8485 TTCCAGCATCTTTGGTAGCCTGACGCTGAGAATCATTAAAGTAAGTGGGTACTGTGACAA 8426
Query 518301 CGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAA 518360
| |||| || || || |||| || || ||| ||| |||| || | ||||
Sbjct 8425 CAGCATGGGTAACAGTCTTCCCAAGGTAGGCTTCTGCTATTTCCTTCACCTTTGTCAAAA 8366
Query 518361 TCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAA 518420
|||| ||||| | | ||||| || | || | || | ||| ||||| ||
Sbjct 8365 TCATGGATGACACCTCCTCTGGATAAAAACTTTTTGTCTCTCCCTTGTATTCTACTTGAA 8306
Query 518421 AATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAA 518480
| || | || |||| | | | || ||||| | |||||||| || || |
Sbjct 8305 CCTTAGGCCTGCCTGCATCATTCACCATCATGAAAGGCCAATGCTTCATATCAGACTGGA 8246
Query 518481 CACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTG 518540
| |||| ||| || ||||| | ||||| |||||||||| | ||||| |
Sbjct 8245 AAACAGCATCATCAAATCTTCGTCCAATGAGGCGTTTGGCATCAAAAACCATGTTGGTGG 8186
Query 518541 GATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATG 518600
|||| |||||| |||| | || || ||||| ||| ||| |||| || || ||||| |
Sbjct 8185 GATTCATTGCAACTTGGTTCTTTGCAGCATCACCAGTCAATCGTTCGGTATCAGTAAAGG 8126
Query 518601 AAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCAT 518660
||||| ||| || || | || || |||||| | ||||| ||||| || || || |
Sbjct 8125 TGACATAGCTTGGGGTAGTTTGGTTCCCCTGATCACTGGCAATTATTTCCACCTTTCCGT 8066
Query 518661 TTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708
|| | ||||| |||||| | | || || || | | |||| ||||
Sbjct 8065 GCTGGAAGACACCCACACAAGAATAGGTGGTGCCAAGACCAATGCCAA 8018
>seq415575
Length=19035
Score = 104 bits (114), Expect = 2e-16
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || | ||||| |||| ||||||||||||||| ||||| ||||| || | ||
Sbjct 1606 TTTTTGTCTAAGCCATAGGCAATAGCAGCAGCAGTTGGCTCATTGATAATCCTAAGTACG 1547
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||||||| |||| |||||||| || || || | || ||||| ||||| ||
Sbjct 1546 TTGAGCCCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAATCATTAAAGTAA 1487
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|| || || || | ||| ||||
Sbjct 1486 GCGGGTACTGTGACAACAGCAT 1465
>seq394555
Length=21707
Score = 104 bits (114), Expect = 2e-16
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500
||||| || || ||||||||||||| ||||||||||| || ||| | || || ||| |
Sbjct 20570 TGTACACTTATCCTGACAGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 20629
Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560
|| |||| ||||| | || || |||||||| |||||||||||||| | |||||| |
Sbjct 20630 GTGGTTGGGAGAGACAAGTACGGGGTTTTCCCTCTTAGAGGAAAACTGCTTAATGTTCGA 20689
Query 635561 GATGCTAGTCCTAAA 635575
|| ||| || ||||
Sbjct 20690 GAAGCTTCTCATAAA 20704
>seq361425
Length=9997
Score = 102 bits (112), Expect = 6e-16
Identities = 153/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 518495 AAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553
|||||| | ||||| | ||||| |||||||||| || ||||| ||||| |||||| |
Sbjct 4 AAATCTTCGTCCAATGAGGCGTTTGGCATCAAAAACCGTGTTGGTAGGATTCATTGCAAC 63
Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613
||| | ||| | ||||| || |||| ||| || || ||||| | ||||| ||
Sbjct 64 TTGGTTCTTG-CAGCATCACCGATCAATCGTTTGGTATCAGTAAAGGCGACATAGCTAGG 122
Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673
|| || | || ||||||||||| ||| | ||||| || || || | || | |||||
Sbjct 123 TGTAGTTTGGTTCCCTTGATCATTGGCAGTTATTTCCACCTTTCCGTGCTGGAAGACACC 182
Query 518674 TACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708
|||||| | | || || || | |||||| ||||
Sbjct 183 CACACAAGAATAGGTGGTGCCAAGATCAATGCCAA 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3759908960483464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |