Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq28820 100 4e-16 >seq28820 Length=18250 Score = 100 bits (110), Expect = 4e-16 Identities = 165/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGG--CCCTAAAATC----GCTTTAGCATTTGCC 197472 ||||| |||||| || | || |||| || ||| | || | ||||||||| ||| Sbjct 16094 ACAGAAATTGAGCACATCGCCTGGAGTGGTCCCCAAGAAGCTTTGGCTTTAGCAGATGC- 16036 Query 197473 AATCCTAAAGACGTTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAA 197532 || ||||| ||| | | || || |||||||||||||| || | ||||| | ||| Sbjct 16035 AAGAGGAAAGA--TTATCTTTATAGACAAAAGCTACCAGGGGCGAATAAACATCACCCA- 15979 Query 197533 ACCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCC 197592 ||| | || |||| || | || ||||| |||| ||||| || || || || ||| Sbjct 15978 --GAACAATTCCTTGTCTATCAACAAGCTGACTCTGAAAGATGCAGGATCCTACAAAGCC 15921 Query 197593 CAAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGTCT 197646 || || ||| |||| ||||| |||||||||| | ||| |||| || |||||| Sbjct 15920 CAGATAAACCAAAAGAATTCTGAAGTCACCACAAGTGAGAAATTCACCCTGTCT 15867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698489634292160