Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq265909 89.7 1e-13 >seq265909 Length=7629 Score = 89.7 bits (98), Expect = 1e-13 Identities = 186/269 (69%), Gaps = 20/269 (7%) Strand=Plus/Plus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | ||| || ||||| ||| ||||||| | || || || || || || | | Sbjct 2095 TTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCA 2154 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 | ||||| || |||||||| || ||| ||| | ||| || | ||||||||||| | | Sbjct 2155 TAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAGTGTTGGTGTTGTACTGT 2214 Query 1078 TTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGAGG-TGATAGGATTGCTCAGTTA 1133 |||||||| || || ||| ||| | | | || ||| |||| | ||||| ||| | Sbjct 2215 TTAATTTTGGCAAAGAAAAG---TTTGA-AGTCAAAAAGGATGATCGAATTGCACAGCTC 2270 Query 1134 ATTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGAT 1187 ||||||| || || | |||| | ||| |||||| ||| ||| ||||| || Sbjct 2271 ATTTGTG-AACGGATATTTT---ACCCA--GAAATAGAGGAAGTTCAAGTTTTAGATGAC 2324 Query 1188 TCGGAAAGGGGTTCTGCAGGATTTGGGTC 1216 | ||||||||||| | ||| ||||| || Sbjct 2325 ACTGAAAGGGGTTCAGGAGGTTTTGGTTC 2353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137987547477264