Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq265909 89.7 1e-13
>seq265909
Length=7629
Score = 89.7 bits (98), Expect = 1e-13
Identities = 186/269 (69%), Gaps = 20/269 (7%)
Strand=Plus/Plus
Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017
|||| | ||| || ||||| ||| ||||||| | || || || || || || | |
Sbjct 2095 TTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCA 2154
Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077
| ||||| || |||||||| || ||| ||| | ||| || | ||||||||||| | |
Sbjct 2155 TAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAGTGTTGGTGTTGTACTGT 2214
Query 1078 TTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGAGG-TGATAGGATTGCTCAGTTA 1133
|||||||| || || ||| ||| | | | || ||| |||| | ||||| ||| |
Sbjct 2215 TTAATTTTGGCAAAGAAAAG---TTTGA-AGTCAAAAAGGATGATCGAATTGCACAGCTC 2270
Query 1134 ATTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGAT 1187
||||||| || || | |||| | ||| |||||| ||| ||| ||||| ||
Sbjct 2271 ATTTGTG-AACGGATATTTT---ACCCA--GAAATAGAGGAAGTTCAAGTTTTAGATGAC 2324
Query 1188 TCGGAAAGGGGTTCTGCAGGATTTGGGTC 1216
| ||||||||||| | ||| ||||| ||
Sbjct 2325 ACTGAAAGGGGTTCAGGAGGTTTTGGTTC 2353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137987547477264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |