Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq414080 84.2 2e-11 seq359707 82.4 6e-11 >seq414080 Length=5684 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/171 (71%), Gaps = 5/171 (3%) Strand=Plus/Minus Query 101263 TAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAA 101322 || |||||| || || || ||||| || ||||| || | ||| | |||| |||| Sbjct 4726 TAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAG 4671 Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 |||||| || ||||| |||| | || || || || ||||| ||||| ||||| || || Sbjct 4670 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGAT 4611 Query 101383 TTTTTGTTTTACAATTT-CTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 || |||||| ||| || || || || | ||| ||||||||||||| Sbjct 4610 CTTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTGA 4560 >seq359707 Length=5412 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || |||||||| ||||| || || ||||||| | ||| | |||| |||| || Sbjct 2590 TGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGTGGCCATCTTCCAGCTGT 2649 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || || || || |||||||||||||| || || || Sbjct 2650 TTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTG 2709 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | | | |||||| | ||||| || || |||| || ||||| || Sbjct 2710 GCCTTCACGTTCTTGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTGCCAGTC 2769 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || || || |||||||| Sbjct 2770 AAGGTCTTCACGAAGATCTGCAT 2792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394242975935508