Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq414080 84.2 2e-11
seq359707 82.4 6e-11
>seq414080
Length=5684
Score = 84.2 bits (92), Expect = 2e-11
Identities = 122/171 (71%), Gaps = 5/171 (3%)
Strand=Plus/Minus
Query 101263 TAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAA 101322
|| |||||| || || || ||||| || ||||| || | ||| | |||| ||||
Sbjct 4726 TAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAG 4671
Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382
|||||| || ||||| |||| | || || || || ||||| ||||| ||||| || ||
Sbjct 4670 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGAT 4611
Query 101383 TTTTTGTTTTACAATTT-CTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432
|| |||||| ||| || || || || | ||| |||||||||||||
Sbjct 4610 CTTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTGA 4560
>seq359707
Length=5412
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| |||||||| ||||| || || ||||||| | ||| | |||| |||| ||
Sbjct 2590 TGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGTGGCCATCTTCCAGCTGT 2649
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||| || | | ||| || || || || |||||||||||||| || || ||
Sbjct 2650 TTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTG 2709
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | | | |||||| | ||||| || || |||| || ||||| ||
Sbjct 2710 GCCTTCACGTTCTTGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTGCCAGTC 2769
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || || || ||||||||
Sbjct 2770 AAGGTCTTCACGAAGATCTGCAT 2792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394242975935508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |