Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq338581 86.0 5e-12 >seq338581 Length=33270 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/208 (70%), Gaps = 9/208 (4%) Strand=Plus/Plus Query 9053 CCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCT 9112 |||||| | | |||| ||||| || ||||||||||| | || ||||| | || | || Sbjct 30010 CCTCTATC--TCTGGG-TAAAATATCTGTTCACAAATGAGATGTGCAATTCGATCACACT 30066 Query 9113 TATTCACGACAAA---GTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCC 9169 | || || |||| ||| || | || ||| ||||| || | || ||||| || | Sbjct 30067 TTTTGACTTCAAACTTTTCTTTGCCAGA---ATTAAACAGTACAATACCAACGTTTCCTC 30123 Query 9170 TGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAG 9229 ||||||| ||||| || |||||||| || || || |||||||| || | || | |||| Sbjct 30124 TGTAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAACCAG 30183 Query 9230 AGCGGGGCGCGATTCGACCGTAGCATCC 9257 | || | || | || || ||||| || Sbjct 30184 AACGCGCAGCTACTCTCCCATAGCACCC 30211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378980971634412