Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 190 4e-43
seq409732 174 3e-38
seq404197 154 3e-32
seq353920 150 3e-31
seq297607 93.3 8e-14
seq327453 86.0 1e-11
>seq366024
Length=42324
Score = 190 bits (210), Expect = 4e-43
Identities = 553/843 (66%), Gaps = 15/843 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| || || || ||||| |||||| ||||||| |||||||| |||| || || |||||
Sbjct 18342 CTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 18283
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTG-TCAGGCCCATCTGTTCCAGC 47956
||| ||| || || || | | | | | | || || | | |||| || ||
Sbjct 18282 CATAAAGTCAAATGGATTT--TCTACTCTGAAAACCTTGCTAAAACCCAGCTCCCGCATA 18225
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| || || ||| | |||||||| | ||| | ||| ||||| || |||||
Sbjct 18224 AGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAAAGTGCAATTCATCCCAATGAGC 18165
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| |||| || | ||||| ||||||| ||||| || || | | | ||
Sbjct 18164 TTCACTGGCAGGGCATCCGTGAGGAACTCCTGTTCTATTCTAACTGCATTGACGATTATT 18105
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136
| || || | ||| || ||||||| ||||||| ||| | | || |||||||
Sbjct 18104 TATTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGA---ATATCAGGCAGGCA 18048
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
||||| | ||| || || ||||| | ||| || || | ||||| || ||| || ||
Sbjct 18047 AAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGT 17988
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|| | || | | |||||||||||| || | || ||||| ||||| |||||||| ||
Sbjct 17987 ATCAGACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCT 17928
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316
|||||||| || || || || | ||||| | | ||| | ||||| |||||||
Sbjct 17927 TCCACTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCTCTTTGTCCCCGATCCAG 17868
Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376
| | ||||| |||||||||||||| | || ||||| ||||| || || ||||||
Sbjct 17867 CACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGA 17808
Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCA 48433
| | || | || || || || | |||| || | ||||| |||
Sbjct 17807 AATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACT---ATACATTTCA 17751
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
|| || | || || || || || |||| || ||||| | ||| || | |||
Sbjct 17750 GAATGGATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGA 17691
Query 48494 ACTTCTGTGGAGAATCT-CTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552
|||||| ||| || || ||||| || || ||||| ||||| ||||| || |||||
Sbjct 17690 ACTTCT-TGGCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAA 17632
Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612
||| || || | ||| || ||||| | ||| | | | || || | |||| |||
Sbjct 17631 GAAAGCCAGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTG 17572
Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672
| ||| ||| |||||||| ||||| | ||||| ||||| || ||||| || ||
Sbjct 17571 AATGTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATA 17512
Query 48673 CAT 48675
|||
Sbjct 17511 CAT 17509
>seq409732
Length=49148
Score = 174 bits (192), Expect = 3e-38
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448
|||| ||||| | || | ||| || ||||| ||||||||| ||||||||||| || |
Sbjct 33734 GCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGCTCGC 33675
Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508
| || | | || || ||||||| || ||||| || | |||||| |||||| || |
Sbjct 33674 GGAGGAGGCCGGCAGTGCTGGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCACCTTGT 33615
Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568
||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| ||||
Sbjct 33614 CCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGCCGGT 33555
Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|||| || | ||| || || | |||||||| |||||||| ||||||| ||| || |||
Sbjct 33554 TCCGCAGCCGCTTGCGCTCTACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGGGAC 33496
>seq404197
Length=65104
Score = 154 bits (170), Expect = 3e-32
Identities = 539/829 (65%), Gaps = 23/829 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| || || || ||||| |||||||||||||| |||||||| |||| || | |||||
Sbjct 53065 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAACTATTCTC 53006
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTG-TCAGGCCCATCTGTTCCAGC 47956
||| ||| || || || | | | | | | || || | | |||| || |||||
Sbjct 53005 CATAAAGTCAAATGGATTT--TCTACTCTGAAAACCTTGCTAAAACCCAGCT---CCAGC 52951
Query 47957 AGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
| | || || | | | | |||||| | ||| | | | ||||| || |||
Sbjct 52950 ATAAGTCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCGCAATTCATCCCAATG 52891
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| ||| | | |||| ||||| ||||||| |||||| || || | | | |
Sbjct 52890 AGCTTCACTGTCGGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACTGCATTGACGATA 52831
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|| | || || | ||| || ||||||| ||||||| ||| | | || | ||
Sbjct 52830 ATTTCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGA---ACATCAGGAAG 52774
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|||||||| | ||| || || ||||| | ||| || || | ||||| || ||| ||
Sbjct 52773 GCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCG 52714
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||| | || | | ||||||||||| || | || ||||| ||||| ||||||||
Sbjct 52713 GGCATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATT 52654
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
|| |||||||| || || || || | || || | | ||| | ||||| ||||
Sbjct 52653 CCTTCCACTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGCCTCTTTGTCCTCGATC 52594
Query 48314 CAG-GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
||| | ||| ||||| |||||||||||||| | || ||||| ||||| ||||| |||
Sbjct 52593 CAGCGCAAG-GCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATGGCGTTGAA 52535
Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACAT 48429
||| | | || | || || || || | |||| || | |||||
Sbjct 52534 GAGAAATTCCCTTTCTTTGGAATCTTGAATGTAAGTGTCAATGAGGAGACT---ATACAT 52478
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
|| || || | || || || ||||| ||||| || ||||| ||| || |
Sbjct 52477 TTCCGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAATAATGGGCTTCCGTAAT 52418
Query 48490 CTGCACTTCTGTGGAGAA-TCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| |||||| ||| || | ||||| ||| || ||||| |||| || || || |
Sbjct 52417 CTGAACTTCT-TGGCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCGTCACTTGCTG 52359
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGC 48608
|| |||| | |||||||| | ||||| | ||| | | | || || | || |
Sbjct 52358 CAGAGAAAGGCAGGACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCGGT 52299
Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
||| | ||| ||| |||||||| || || | ||||||||||| ||
Sbjct 52298 GCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCCGTCCAGAAGGAAGC 52250
>seq353920
Length=8827
Score = 150 bits (166), Expect = 3e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| || |||||||| || ||||| | | ||| || | |||
Sbjct 7968 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGC 8027
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | | ||||||| ||||||||||||||| || |||| |||||| |||||
Sbjct 8028 TCCGTGTTTTGACTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 8087
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| |||||| |||| ||| || | |||||| || || | ||| || ||||||||
Sbjct 8088 TTGCGCTTGCGGCACTTGGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 8147
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| ||||| ||||||||||| || |||
Sbjct 8148 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 8180
>seq297607
Length=725
Score = 93.3 bits (102), Expect = 8e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||| ||||| | ||||| || | ||||| |||| |||
Sbjct 149 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 90
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | ||||||||||| || |||||| ||||||||||
Sbjct 89 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 30
Query 241619 ATCGGAGAC 241627
|| || |||
Sbjct 29 ATGGGGGAC 21
>seq327453
Length=26950
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|| ||||| | || || |||||||||||||||||| ||| || || |||||||| |||
Sbjct 25159 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCTAGGTTCTGCTGG 25218
Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
||| || || | || ||||| |||||||||||||| |||| || |||||| |||
Sbjct 25219 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 25277
Query 213647 GGAC 213650
|||
Sbjct 25278 AGAC 25281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 926625438632960
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