Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq356745 89.7 9e-13 >seq356745 Length=38052 Score = 89.7 bits (98), Expect = 9e-13 Identities = 116/159 (73%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| || || ||||| || | ||| || || | |||||| ||||||||||| Sbjct 19891 ATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTT 19950 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| || ||||| |||| ||||| | ||||| || Sbjct 19951 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGAT 20010 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| || || || | || || ||||| || Sbjct 20011 GGTCTT-CCTGTCAGGGTCTTCATGAAAATCTGCATCTT 20048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894914975638080