Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq364176 100 6e-16
seq356745 98.7 2e-15
seq336898 95.1 2e-14
seq414080 91.5 3e-13
seq393589 91.5 3e-13
seq404197 86.0 1e-11
seq359707 86.0 1e-11
>seq364176
Length=18321
Score = 100 bits (110), Expect = 6e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| ||| | || || | ||| | ||| | ||| ||| ||| | || | ||||
Sbjct 5338 ACCACCGTGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAG-TGTTGTGGTCAG 5396
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||| | ||| || || ||||| |
Sbjct 5397 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAG 5456
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| | | | ||| | | ||| |
Sbjct 5457 GAATTCCTTCCTTATCCTGGATCTTGGCGTTTACATTTTCTGTTGTATCCAAGGGTTCGA 5516
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || ||||| ||||| || || || | || || | || |||||||| ||
Sbjct 5517 CCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 5568
>seq356745
Length=38052
Score = 98.7 bits (108), Expect = 2e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || || || ||||| | || | |||| |||| ||| || ||||||||||
Sbjct 19858 CTTTTGA-ATGTTGTAGTCAGACGAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAGA 19916
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| | ||| || || | ||| || |||||||||||||| || || || ||||||||
Sbjct 19917 TCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTT 19976
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
||| | |||||| | ||| || | ||||| ||||| || || || | || || || |
Sbjct 19977 CTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCATGA 20035
Query 192527 ATATCTGCATTTT 192539
| |||||||| ||
Sbjct 20036 AAATCTGCATCTT 20048
>seq336898
Length=33758
Score = 95.1 bits (104), Expect = 2e-14
Identities = 163/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| ||| | | ||| | ||| | ||||| ||| ||| || || || || ||||
Sbjct 29876 ACCACCATGAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 29818
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||| | | | || || ||||| |
Sbjct 29817 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAG 29758
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGAATCTGACGATTCT 192486
| |||||||| || || || | || |||||||| | ||| | ||| || | |||
Sbjct 29757 GAATTCCTTCCTTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCCGAGGGTTCA 29698
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || ||||| |||| | || || | || || | || |||||||| ||
Sbjct 29697 ACCTCGAGAGTGATGGCCATCCCTGTCAGGGTCTTCAAGAAAATCTGCATATT 29645
>seq414080
Length=5684
Score = 91.5 bits (100), Expect = 3e-13
Identities = 117/158 (74%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| |||| ||| || ||||||||||| | ||| || || ||||| || |||||||| |
Sbjct 4680 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCT 4621
Query 192440 TATCTTGTATTTTATTTTTTACATTAGT-TATAGAATCTGACGATTCTACTTCTAGAGTA 192498
|||| || || || |||||||| | | | | |||||| | ||| ||||| |||||
Sbjct 4620 TATCCTGGATCTTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTG 4561
Query 192499 ATGGT-TTTACCAGTTAATGTTTTAATAAATATCTGCA 192535
||||| | |||| || || || || || |||||||
Sbjct 4560 ATGGTCATCCCCAG--AAGGTCTTCATGAAAATCTGCA 4525
>seq393589
Length=19132
Score = 91.5 bits (100), Expect = 3e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || || || ||||| || || ||| |||| |||| ||| || ||||||||||
Sbjct 8032 CTTTTGA-ATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 7974
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| | ||| || || ||||| | |||||||| || || || || || ||||||||
Sbjct 7973 TCAGTCTTTGCTGGTCAGGGGAAATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 7914
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
||| | ||| | | ||| || | ||||| ||||| || || || | || || || |
Sbjct 7913 CTATTGTATCCAAGGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCATGA 7855
Query 192527 ATATCTGCA 192535
| |||||||
Sbjct 7854 AAATCTGCA 7846
>seq404197
Length=65104
Score = 86.0 bits (94), Expect = 1e-11
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 49827 GCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 49886
||||| ||| |||||||||||||| || |||| |||||| ||| || | ||
Sbjct 52773 GCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCG 52714
Query 49887 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 49946
||||| | ||||| || || ||||| ||||| ||||||||| || ||||||||| ||
Sbjct 52713 GGCATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATT 52654
Query 49947 CCCTCGACACACGCAAATGCTA 49968
|| || || ||||| ||||
Sbjct 52653 CCTTCCACTGCGGCAAAGGCTA 52632
>seq359707
Length=5412
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| || ||||| | || | || | |||| |||||| ||| | ||||||||
Sbjct 2566 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAA 2625
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| | |||| |||| ||||| || |||||||| | ||||| || ||||| ||
Sbjct 2626 GGAGTGTGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 2685
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| ||||||||||| || || || || || || | || | || || || ||
Sbjct 2686 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGACTCCACC 2745
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || ||||| || || || | || |||||||||||
Sbjct 2746 TCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATTTT 2795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 979164052889400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |