Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 165 2e-35
seq378433 86.0 2e-11
>seq366024
Length=42324
Score = 165 bits (182), Expect = 2e-35
Identities = 388/573 (68%), Gaps = 22/573 (4%)
Strand=Plus/Plus
Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135
||||| || || || || || || | || ||||||||||||||||| ||| | | |
Sbjct 17470 TTTGTCATCTTTCCTATCAAATACCATGATATTTGGCAGATGTATAAGAAAGCTGAGGCT 17529
Query 133136 TTATTTTGGACTTCAACTGAA---GTAGATTTATCCAAAGAC--CCAGCCCACTGGGAAG 133190
| ||||||| || ||||| || || | ||||| ||| ||| ||||||||||
Sbjct 17530 TCCTTTTGGA---CAGCTGAAGAGGTGGACCTTTCCAAGGACATTCAG--CACTGGGAAG 17584
Query 133191 CCCTTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTG 133250
|||| | || || | | |||| ||||| ||| | || || ||||| || ||||
Sbjct 17585 CCCTGAAGCCTGAGGAGAGATATTTCATTTCGCATATTCTGGCTTTCTTTGCAGCAAGTG 17644
Query 133251 ATGGTATTGTTCTTGAAAATTT--AGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGA 133308
|||| || || |||||| || ||| || ||||| ||||||||| | | ||
Sbjct 17645 ATGGCATAGTAAATGAAAACTTGGTGGAGCA--GTTTAGCCAAGAAGTTCAGATTACGGA 17702
Query 133309 AGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCT--ATCACATAT 133366
||||||| || ||||| | | ||||| |||||||| ||||||||| | |||
Sbjct 17703 AGCCCGTTGTTTCTATGGCTTCCTAATTGCCATGGAAAACATCCATTCTGAAATGTATAG 17762
Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCC 133426
||| ||| ||||| |||||||| |||||| || | | | | || ||||||||
Sbjct 17763 TCTCCTC--ATTGACACTTACATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGCT 17820
Query 133427 ATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485
||| | || | | |||||| | || ||||| | || ||||| | |||||| |||
Sbjct 17821 ATT-GAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGTGCTGGATCGGGGA 17879
Query 133486 CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt 133545
||| || | | || ||| |||| || ||||||| ||| || || || || ||
Sbjct 17880 CAAAGAGGCTACGTATGGAGAACGTTTCGTAGCCTTTGCTGCAGTGGAAGGAATCTTCTT 17939
Query 133546 CAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604
|||| | || ||| || || || ||||| ||||| || ||| | |||| || ||
Sbjct 17940 TTCTGGTTC-TTTTGCATCGATATTCTGGCTCAAAAAACGAGGTCTGATACCCGGCCTCA 17998
Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637
||||| || ||||||||| || |||||||
Sbjct 17999 CATTTTCCAATGAACTTATTAGCAGAGACGAGG 18031
>seq378433
Length=24221
Score = 86.0 bits (94), Expect = 2e-11
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || || || |||||||| || || || || ||||||| ||||| |||||
Sbjct 14896 ACCAGTCTCAGCAGTCTTGACAGCTGTGTCGATGAGCCCCTCACGACCCCCCATGGCATG 14837
Query 302667 GAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCG 302725
|||||| | ||| || ||| || || | | ||||| |||| || || |||||
Sbjct 14836 GAAGAAGAACTCGGTGGG-CGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGC 14778
Query 302726 CCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATG 302785
||| ||| || || ||| | ||||| ||||| |||| || || | || | |
Sbjct 14777 TCTCAGGCCCATAATCATCTTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAACCCAAACG 14718
Query 302786 GGATACGCTTTCCATCAACGTTCTGCTGTCC 302816
|||| ||||| || || ||||||||||| ||
Sbjct 14717 GGATCCGCTTGCCCTCCACGTTCTGCTGCCC 14687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1463870151074628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |