Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq356745 109 5e-19
seq393589 100 3e-16
seq397823 98.7 9e-16
seq336898 95.1 1e-14
>seq356745
Length=38052
Score = 109 bits (120), Expect = 5e-19
Identities = 146/199 (73%), Gaps = 3/199 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || || || || || || || || || || ||| | || ||| | |
Sbjct 20046 GATGCAGATTTTCATGAAGACCCTGACAGG-AAGACCATCACTCTCAAGGTTGAACCTTC 19988
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || ||||||||||| ||||| | ||
Sbjct 19987 AGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATCCCTCCTAACCA 19928
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881
||| | |||||||||| || || || |||||||| | | | || | ||| || || |
Sbjct 19927 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGA-TGGCCATACTTCGTCTGACTACA 19869
Query 24882 ACATTCAAAAGGAATCGAC 24900
||||||||||||| || ||
Sbjct 19868 ACATTCAAAAGGAGTCCAC 19850
>seq393589
Length=19132
Score = 100 bits (110), Expect = 3e-16
Identities = 152/215 (71%), Gaps = 1/215 (0%)
Strand=Plus/Plus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
||||||| || || || || || || || || || || || ||| | || ||| || |
Sbjct 7846 TGCAGATTTTCATGAAGACCCTGACAGG-AAGACCATCACTCTCAAGGTTGAACCCTTGG 7904
Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
| ||| |||||| ||||| |||||||| ||||| |||||||| | || || || |
Sbjct 7905 ATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 7964
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
|| | |||||||||| || || || ||||| ||| | | |||| || || ||||
Sbjct 7965 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 8024
Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||||||| || | || || | |||||| ||
Sbjct 8025 TTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGA 8059
>seq397823
Length=5921
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || | || || || || || || || ||||| || ||| || |
Sbjct 1894 GATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTC 1835
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| ||||| ||||| ||||||||||| || |||| ||| ||| | | ||
Sbjct 1834 GGATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCA 1775
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| ||||| || || || ||||| ||| | | |||| || || ||
Sbjct 1774 GCAAGGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 1715
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|| ||||||||| || || || || | ||||| ||
Sbjct 1714 CAGTCAAAAGGAGTCCACTCTTCATCTTCTGTTGAGA 1678
>seq336898
Length=33758
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/209 (71%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || | | || || ||||| || ||| || |
Sbjct 29648 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCG 29707
Query 24764 GACACAGTAGAAACG-GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||| ||| ||||| |||||||| ||||| || ||
Sbjct 29708 GATACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 29767
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 29768 GCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 29827
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||||||||| || || || || ||||
Sbjct 29828 CATTCAAAAGGAGTCTACTCTTCATCTTG 29856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447527516948320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |