Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq381406 156 4e-33
seq325509 98.7 9e-16
>seq381406
Length=23923
Score = 156 bits (172), Expect = 4e-33
Identities = 607/946 (64%), Gaps = 45/946 (5%)
Strand=Plus/Plus
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
||||||||||||||| | || || |||||||||||||| || || || |||||
Sbjct 13522 AAGACCCTAGCTGCCATAGGGACAGGATTTGACTGTGCCAGCAACACTGAAATCCAGTTG 13581
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
|| ||| || || | | || ||||| | | ||| ||||||| ||| ||
Sbjct 13582 GCACAGGGTCTCGGGGTGCCTCCTGAGAGGATTTTCTATGCAAATCCTTATAAACAAGTG 13641
Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503
|| || || | || || || | | |||||| | ||||||||||||||||||||
Sbjct 13642 TCTCAGATTAAATACGCTGCCAATAATGGAGTCCAGACGATGACTTTTGATAGTGAAGTT 13701
Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563
||| | | ||| ||| | || | | || ||| |||| || ||||| |
Sbjct 13702 GAGTTGATGAAAGTTGCCAGGGCACATCCAAAGGCCAAGTTGGTTTTGCGGATTGCCACG 13761
Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623
||||| || || ||| | | || |||||||| ||||| || | | || |||||
Sbjct 13762 GATGATTCCAAAGCAGTCTATAGCCTCAGTGTCAAATTTGGTGCCACACTCAAAACCAGC 13821
Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683
| || || ||| ||| ||| | ||| | || || || || ||||||||||||
Sbjct 13822 AGGCTTCTTCTGGAACGGGCGAAAGAGCTAGATATTGATGTCATTGGTGTCAGCTTCCAC 13881
Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743
||||| ||||| | | ||| || | | | || | ||||| |||| ||| | |
Sbjct 13882 GTGGGAAGTGGTTCTACTGATCCAGGGACCTTCATGCAGGCCATCTCTGATGCCCGCTGT 13941
Query 20744 GCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGCG 20801
| |||||| | || ||||| | || || ||||||| || | || |||||||| |
Sbjct 13942 GTCTTTGACAT--GCGAGCTGAGGTTGGTTTCAACATGTATCTGCTTGACATTGGTGGTG 13999
Query 20802 GCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTA 20858
||||| || ||||| |||| || ||| | ||||| || || | || || |
Sbjct 14000 GCTTT-CCTGGATC--TGAGGATGTAAAGCTTAAATTTGAAGAGATCACCAGTGTAATCA 14056
Query 20859 ACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTG 20918
|| | || ||||| | | |||||||| || | ||| ||| || | ||| || |
Sbjct 14057 ACCCAGCGTTGGACAAGTATTTTCCATTAGACTCTGGAGTGAGAATCATAGCTGAGCCAG 14116
Query 20919 GCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA--GTG 20976
| || ||||| | | | || || | || |||| | | | | ||||| ||||| |
Sbjct 14117 GAAGATACTATGTTGCATCAGCTTTCACGCTAGCAATTAATATCATTGCCAAAAAACTCG 14176
Query 20977 TGTTGAAG--ACA------CTC-----CTGGAGA---------TAAAAAG---TTTATGT 21011
| || ||| ||| ||| || ||| | || || |||||||
Sbjct 14177 TATTAAAGGAACAGACAGGCTCTGATGATGAAGATGAGTTGAGTGAACAGACATTTATGT 14236
Query 21012 ATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTC 21071
||||||| |||||||| || ||||| || |||||||| | || | ||||| |
Sbjct 14237 ATTATGTGAATGATGGAGTATATGGATCATTCAACTGCATCCTCTTCGATCATGCACACG 14296
Query 21072 CTATGCCTATGCTGCTTAAAGAA-AAACGCCTTGAAGACAAAGACTATGTTTC---TAGC 21127
| |||| | |||| |||| | || | ||| || | ||| ||| ||||
Sbjct 14297 TGAAGCCTCTTCTGC----AGAAGAGACCCAAACCAGATAAGAAGTATTATTCATGTAGC 14352
Query 21128 ATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAG 21187
|| ||||| || | ||| |||||| | ||| ||| |||| | || | | | |||| ||
Sbjct 14353 ATCTGGGGACCAACCTGTGATGGCCTGGATCGCACTGTTGAACGCTATAACTTGCCCAAG 14412
Query 21188 CTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA 21233
| || ||||| || ||| | | |||||||||||||| |||||||
Sbjct 14413 ATGCATGTGGGTGATTGGATGTTCTTTGAAAACATGGGTGCTTACA 14458
>seq325509
Length=6024
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/177 (74%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| ||||| ||||| || | ||| |||||| | ||| |||||||| |||| ||| | ||
Sbjct 439 TCCAGCATCTGGGGACCGACCTGTGATGGCCTGGATCGCATTGTTGAGCGCTGTAACTTG 380
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241
|| ||| | || |||||||| ||| | | |||||||||||||| ||||||| || |
Sbjct 379 CCCGAGATGCATGTGGGCGATTGGATGCTCTTTGAAAACATGGGTGCTTACA-CTGTCGC 321
Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296
||| |||| || || || || || ||| || | || | | ||||||| || ||||
Sbjct 320 TGCTGCTTCCACTTTCAATGGATT-CCAGAGACCGACCATCTACTATGTGATGTCAG 265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461103618601920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |