Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_024382.1
Length=137090
Score E
Sequences producing significant alignments: (Bits) Value
seq394374 271 7e-68
>seq394374
Length=35152
Score = 271 bits (300), Expect = 7e-68
Identities = 497/719 (69%), Gaps = 52/719 (7%)
Strand=Plus/Plus
Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130
||||||| ||||||||||||||||||| ||||||| |||| || | | | ||||||||
Sbjct 32220 CCACAGCCCTAGCTTCTGGTCTGAAAA-GAGTAGGCTTCTTCTGGGGGCAATGGAAGGCA 32278
Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGTT 1190
||||||||||| ||||| ||||| |||||| | |||||||||| || || | || ||||
Sbjct 32279 TTTTAAAGAAATGGCTTGGAAAAGAAATCTCGAGGGCACTTACGTAGTCATTCAAGAGTT 32338
Query 1191 TTGAAAATGAGAACTGTAGTTCTGTGATTACAGCTGATTGTATGTCCCGTGGTAG----T 1246
| ||| ||| || ||| ||| |||||| |||| |||| | || || ||| |
Sbjct 32339 TCTCAAACGAGGACCGTAATTCCTTGATTATAGCTTGTTGTTTATCTGGTCCTAGCATAT 32398
Query 1247 GGATGGCCG--TGGGAGGAGAGCAAGGCTCCGGAACAGCAGAGCAGGAACAGGGCAAGCC 1304
| |||| |||||||| ||||||||||| ||||||||||| ||||||||||||| ||
Sbjct 32399 AGGGTGCCGTATGGGAGGACAGCAAGGCTCCCGAACAGCAGAGAAGGAACAGGGCAAACC 32458
Query 1305 CTGAAGATTTTGTAAAAATAGAGTAATGCCCACACACCCCCACCTGCCCCATACCTTAAC 1364
| |||| || | ||| | || || || | || ||| || ||| | |
Sbjct 32459 TGGCAGATCCTGGAGAAAGAAGGTGAT--CCCGGGAGGAGCAGAGGCCGCACACCCCAGC 32516
Query 1365 CTG--CCCAAGCTTTCACCACCGAAGCTG-TGCCG------GACTGAGCCCCATCCAGTC 1415
| | ||| |||| ||| | | || | || || | ||||||||| ||||| |
Sbjct 32517 CCGCCCCCCGGCTTCAACCGCTCAGGCCGTTGTCGAGCAGTGGCTGAGCCCC-TCCAGCC 32575
Query 1416 TTTCTCTTTGTCTAGGGAAACTCGACCGCACCCACCAGCATCAATGGCTGTAGGACCTAT 1475
|| |||| ||||| | || || |||| | ||| | ||| | | |||
Sbjct 32576 TTCCTCTCTGTCTGGTGAGACCCGACTGTGCCCCGC---------GGCCGCGGCACCCCG 32626
Query 1476 CGATACCTGAGGGGGATACTATAGCAGGAGAGAGCGAGGCCGCCGCTTTGGCAACAGCTG 1535
| |||||| | |||| || || | |||||||||||| || | || |||||||||
Sbjct 32627 TGGTACCTGCGTGGGAGACCATGGTGGGAGAGAGCGAG---GCTGTTTCAGCAACAGCTC 32683
Query 1536 CTAGAGTGAGATGTGCTCGCTATACTTTTAGGGAACTGTATATAAAGGGCTAGTTGTAAG 1595
|| || |||||||||||| || | || ||| | |||||||||||| | | | ||
Sbjct 32684 CTGGACCCAGATGTGCTCGCCATGGTCTTCAGGAGC--TATATAAAGGGCCAATGGCGAG 32741
Query 1596 ---GAGGAGCACTAAAAGTACCGCCCACGGTAAAGTCATTACT-----------CAGAAA 1641
|||| ||| | | | || |||| || ||| |||||||| ||||||
Sbjct 32742 GAAGAGGGGCAATCACTCTCCCACCCATGGCAAAATCATTACTCAGCTTTTTCCCAGAAA 32801
Query 1642 ACA-TTTCAAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAAA---TGA 1697
||| ||||||| | ||||| | | ||| | |||||| |||| |||||||| |||
Sbjct 32802 ACACTTTCAAAAGTCTGCCACCCAAGGCTGGGTGAAAGCAGGGCTGGAAGGAAATGCTGA 32861
Query 1698 AGTTACCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGGGCACCCACA 1756
|||||||| ||| |||||||| || ||| || | || ||||||| | ||||| ||||
Sbjct 32862 GGTTACCCTCAAGGTGGGCAGACGCCTGATTCAGTACAGATACACA-CAGGCACACACA 32919
Score = 178 bits (196), Expect = 1e-39
Identities = 341/495 (69%), Gaps = 41/495 (8%)
Strand=Plus/Plus
Query 287 AACAACTTACAGCAGAATTCTCGTACACAGAGGGCACTAA---------TCTTAAGGCTC 337
|| |||| |||||||||||||| || || | |||| | | ||||||||
Sbjct 30554 AATAACTCACAGCAGAATTCTCACACTTAGCTGTCACTCATTTTTTTTTTTTTAAGGCTT 30613
Query 338 TTTGCATTCCTGCCATT-CAAAAGGAACAGGGTCAACCACATGGTCTTCAGTGACCT--- 393
|||||| |||||||| |||||||| |||| ||||||| |||| || | ||||||
Sbjct 30614 CATGCATTTCTGCCATTCCAAAAGGACCAGGTTCAACCAGATGGCTTTAAATGACCTACT 30673
Query 394 ----TCCAGGCTTCAGTG---CCCACTAATTTCAGGCACTTTGAAAACATTTCTAAAACA 446
||||| |||| || || ||||||| |||| ||||||| ||| ||||| |
Sbjct 30674 GGGCTCCAGCGTTCAATGATTTAAACAGATTTCAGACACTCTGAAAACTTTTTTAAAATA 30733
Query 447 CACTGTATGAACACtttttt---ttGATAGCTGTCTGTAGGCATAGAAA------TGTCT 497
|| ||||| ||||||| || | |||| |||||||||| ||||| | |||
Sbjct 30734 GACACGATGAA-GCTTTTTTACATTTAAAGCTCTCTGTAGGCACAGAAACCTTTGTTTCT 30792
Query 498 GGTGCGCGTTGCAATTCAAGTTTTTTGAGATGGTCCATGACATCAGTAAAACT--ATTTG 555
||| | || | ||||| ||||| |||||||||| |||| || | |||| | ||
Sbjct 30793 GGTTCATGTCGAAATTCGAGTTTACTGAGATGGTCTGTGACGGCA--ACAACTTGAGTTT 30850
Query 556 TGTCATTAAAAAATGATTTGATGGCTCTAAAATAAGGCAGGATGGCTGAACTGTTGATGT 615
|| || ||| ||| |||||| ||||| | ||||||| | ||||||| | || |
Sbjct 30851 CGTTATGGAAAGATGGTTTGATCGCTCTGCAGTAAGGCAAG-TGGCTGAGCAGTCCTCGC 30909
Query 616 TGTGTGGTGGCTGGGGGCTCACAGAAAAGCACTGCATGCGGCACGTGCATGATTTTACTA 675
||| ||| |||||||| ||| || || || |||| || || || || ||
Sbjct 30910 TGTATGGCAGCTGGGGGTTCAGAGCGAAATACGGCATCTGGTAC-TGGCTGCGTTCCGGC 30968
Query 676 ATCCCTTATTCTCTTTCTGCTTCTGTG---GAAGGAGAGGAAATGGGTGAGCATTAGTGT 732
| ||| |||||| ||||| ||||| |||||| |||| ||||||||| ||||| |
Sbjct 30969 ACTCCT--CTCTCTTCCTGCTGCTGTGTAACAAGGAGGGGAAGTGGGTGAGCGTTAGTTT 31026
Query 733 TGTAAAGCAGTCAGA 747
|| ||| ||| ||||
Sbjct 31027 TGCAAAACAGCCAGA 31041
Score = 86.0 bits (94), Expect = 5e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 166 CCACACACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTT 225
|| || |||| | | |||||| ||| ||| ||||||| ||| |||||||||||| |||
Sbjct 30243 CCCCAAACAAAACGCCAAACAGAGTATGAGACAAATTCAATATCATTTATTAAATAGTTT 30302
Query 226 TCAAGGGCTTCTTTAAGAAGCATTAACAATCT 257
|||||||| || ||| ||||||||||||||
Sbjct 30303 CCAAGGGCTCCTCCAAGGAGCATTAACAATCT 30334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 436249643992000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |