Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq364176 141 2e-28
seq411564 140 6e-28
seq418776 138 2e-27
seq258579 136 8e-27
seq336898 131 3e-25
seq397823 127 4e-24
seq393589 127 4e-24
seq356745 125 1e-23
seq168090 123 5e-23
seq414080 107 4e-18
seq408215 96.9 7e-15
seq376890 95.1 2e-14
seq129591 95.1 2e-14
seq391508 87.8 4e-12
>seq364176
Length=18321
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || | || | ||||| | | | | || ||||| |||||
Sbjct 5363 TGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTACGTCCATCTTCCAGTTGC 5422
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| || || ||||| |||||||||||||| || |||||
Sbjct 5423 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 5482
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| | ||||| ||||| || || | ||| || ||||| || |||
Sbjct 5483 GCGTTTACATTTTCTGTTGTATCCAAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTC 5542
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 5543 AGGGTCTTCACGAAAATCTGCAT 5565
>seq411564
Length=61085
Score = 140 bits (154), Expect = 6e-28
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || || | ||| || || | |||||| ||||| |||||||| || || ||||||||
Sbjct 40443 CCACCCCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAA 40502
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | | |||||||| || ||||| || |||||||| || || || || || || ||
Sbjct 40503 ATAGTGCGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 40562
Query 82704 --ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
|| ||||||||||| || ||||| || || ||||| | || || ||| | || || |
Sbjct 40563 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCA 40622
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||| |||| ||||| | || ||||||||
Sbjct 40623 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 40671
>seq418776
Length=96061
Score = 138 bits (152), Expect = 2e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||| || || | ||||| || || |||||||| || || ||||||||
Sbjct 55105 CCACCCCTCAGACGGAGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAA 55046
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || ||||| || ||||| || |||||||| || || || | || || ||
Sbjct 55045 AGAGTGCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGG 54986
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| || ||||| || || ||||| || || || ||| | | || ||
Sbjct 54985 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACC 54926
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || ||||||| ||| ||||| || || ||||||||
Sbjct 54925 TCCAGGGTGATGGTCTTGCNNNTCAGGGTCTTCACGAAGATCTGCAT 54879
>seq258579
Length=20613
Score = 136 bits (150), Expect = 8e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||| || || || || | || || ||||| | ||| | || ||||| |||||
Sbjct 19171 TGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGTCCATCTTCCAGTTGC 19112
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || |||||||| |||||||| || || ||||| ||||||||||| || || |||||
Sbjct 19111 TTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 19052
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || | ||| ||||| || || | ||| || ||||| || |||
Sbjct 19051 GCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTGATGGTCTTCCCCGTC 18992
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 18991 AGGGTCTTCACGAAAATCTGCAT 18969
>seq336898
Length=33758
Score = 131 bits (144), Expect = 3e-25
Identities = 152/204 (75%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||||| || || || || || || ||||| | | | | || ||||| |||||
Sbjct 29851 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 29792
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| ||| |||| || || ||||| ||||||||||| || || ||||
Sbjct 29791 TTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGCTCTTG 29732
Query 82728 GCTTTTACA-TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| |||||| ||||| || ||||| ||||| || || | ||| || | | | |||||
Sbjct 29731 GCCTTTACATTTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGCCATCCCTGT 29672
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
|| ||||| | || ||||||||
Sbjct 29671 CAGGGTCTTCAAGAAAATCTGCAT 29648
>seq397823
Length=5921
Score = 127 bits (140), Expect = 4e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || | || || ||||| | | | | || ||||| |||||
Sbjct 1691 TGAAGAGTGGACTCCTTTTGACTGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 1750
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||||||| || | || ||| || | | ||| ||| ||||||||||||| |||||
Sbjct 1751 TTGCCAGCAAAAATCAATCCTTGCTGGTTAGAAGGAATTACTTCCTTATCTTGGATCTTG 1810
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| | ||||| ||||| || || | ||| || ||||| ||||||
Sbjct 1811 GCGTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCTGTC 1870
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| |||| ||||| ||||||||
Sbjct 1871 AGGATCTTCACAAAAATCTGCAT 1893
>seq393589
Length=19132
Score = 127 bits (140), Expect = 4e-24
Identities = 150/202 (74%), Gaps = 1/202 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||| || || || || || || || ||||| | | | | || ||||| |||||
Sbjct 8046 TGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 7987
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| || || || | ||||||||||| || || |||||
Sbjct 7986 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCCTTGTCCTGGATCTTG 7927
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || | | ||| || ||||| ||||||
Sbjct 7926 GCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTC 7868
Query 82788 AACGTCTTTACAAATATCTGCA 82809
| ||||| | || |||||||
Sbjct 7867 AGGGTCTTCATGAAAATCTGCA 7846
>seq356745
Length=38052
Score = 125 bits (138), Expect = 1e-23
Identities = 149/198 (75%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA-CCGTCTTCTAGTTGTTTTCC 82672
|| || || || || || || || ||||| ||| | | || || || ||||| || ||
Sbjct 19850 GTGGACTCCTTTTGAATGTTGTAGTCAGAC-GAAGTATGGCCATCCTCCAGTTGCTTGCC 19908
Query 82673 AGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTT 82732
||||||||| |||||||| || | ||||| |||||||| ||||| || ||||| || ||
Sbjct 19909 AGCAAAGATCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCTT 19968
Query 82733 TACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792
||||||||| || ||||| |||||| || | | ||| || ||||| ||||||| ||
Sbjct 19969 TACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTT-CCTGTCAGGGT 20027
Query 82793 CTTTACAAATATCTGCAT 82810
||| | || ||||||||
Sbjct 20028 CTTCATGAAAATCTGCAT 20045
>seq168090
Length=9538
Score = 123 bits (136), Expect = 5e-23
Identities = 151/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666
|||||| || || |||||||| || || | |||||| ||| | || ||||| || ||
Sbjct 8507 GTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCTTCCAGATG 8566
Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726
|| || |||||||| || || || || || ||||| || ||||||| ||| || |||||
Sbjct 8567 CTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAGG-ATGCCTTCCTCATCCTGGATCTT 8625
Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| || ||||| || | ||| | || ||||| |||| || || ||||||| ||
Sbjct 8626 GGCCTTCACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGT 8685
Query 82787 CAACGTCTTTACAAATATCTGCATT 82811
||||||||| || || || ||||||
Sbjct 8686 CAACGTCTTCACGAAGATTTGCATT 8710
>seq414080
Length=5684
Score = 107 bits (118), Expect = 4e-18
Identities = 120/158 (76%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| ||||| || ||||||||||| |||||||| || || ||||| |||||||||
Sbjct 4681 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 4622
Query 82713 TTATCTTGAATCTTTGCTTTTACA-TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT 82771
||||| || ||||| | |||||| ||||| | ||||| ||||| ||||| | |||
Sbjct 4621 TTATCCTGGATCTTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGT 4562
Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809
|| ||| | || || ||||| | || |||||||
Sbjct 4561 GATGGTCAT-CCCCAGAAGGTCTTCATGAAAATCTGCA 4525
>seq408215
Length=16836
Score = 96.9 bits (106), Expect = 7e-15
Identities = 122/168 (73%), Gaps = 5/168 (3%)
Strand=Plus/Plus
Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214
|||||||||| ||| |||||||| || || || || || || |||||||| || || |||
Sbjct 3392 TGGTGGTACTTTATTTCTAAAGGCATTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 3451
Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274
|| ||| || || || || | |||||||||||||| | ||| |||||||| ||
Sbjct 3452 AAGAAGAACAACCAAGTCTCCTTCCTTCACGTATATCATCACTGTACAATGTTTACATTG 3511
Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGG-----AGGTCAAGCATTTT 60317
| ||| | || ||||| ||| | || || ||| |||||||||
Sbjct 3512 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAGGGTAAGCATTTT 3559
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 60309 AAGCATTTTTCGGAGCTCAGTTGAATTCCTTAATCCATGTTATTATGTATACTTATTATG 60368
|||||||||||||||| ||| |||||||||| |||||||| |||||||| | || || |
Sbjct 4602 AAGCATTTTTCGGAGCCCAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTACG 4661
Query 60369 GTATGGCGGCGTGTGGACCTATGTTTAAAAAGTATTTATGGTGGAAGCGTTATCTTACTA 60428
| | | || | ||| || | || | |||||| | |||||||| | ||||| || |
Sbjct 4662 GGTTAACTGCCTTTGGCCCATGGATTCAGAAGTATCTTTGGTGGAAACAATATCTGACCA 4721
Query 60429 TAATGCA 60435
| ||||
Sbjct 4722 TGCTGCA 4728
>seq376890
Length=3850
Score = 95.1 bits (104), Expect = 2e-14
Identities = 97/126 (77%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| |||| ||||| | |||||||||| |||||||| ||||| ||||| ||||||| |
Sbjct 2130 CCATCTTGCAGTTGCTAGCCAGCAAAGA--AGTCTTTGCTGATCAGGAGGAATTCCTTTC 2073
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
|| || || ||||| || ||||||||||| || ||||| ||||| || |||| ||
Sbjct 2072 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCCAGGGTTCAACCTCCAGGGTG 2013
Query 82773 ATCGTC 82778
|| |||
Sbjct 2012 ATGGTC 2007
>seq129591
Length=11435
Score = 95.1 bits (104), Expect = 2e-14
Identities = 149/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| | || ||||||||||| |||||||| || || ||| | | || |
Sbjct 4880 AGCACCAAGTGTATGGTGGATTCTTTCTGGATATTATAGTCTGAGAGAGTACGGCCACCC 4821
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || ||||| | ||||| || || || ||||| | ||| | || | || | |||
Sbjct 4820 TC-AGCTGTTTGTCTGCAAAAATCAGACTGTGTTGGTGTGGCAGGATGTCCTCAGTGTCT 4762
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
| || || ||||| ||||| ||||| || || | | | || || | ||| || |||
Sbjct 4761 TTGATTTTGGCTTTGACATTCTCAATGGTGACACTGAGCTTGACCTCAAGAGTGATGGTC 4702
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||| ||||| ||||| ||||||||
Sbjct 4701 TTGCCCATCAGGGTCTTCACAAAGATCTGCAT 4670
>seq391508
Length=33085
Score = 87.8 bits (96), Expect = 4e-12
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| ||| | || ||||||||||| |||||||| |||| ||||| ||||||||
Sbjct 12235 CCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTTTGCTGATAAGGAGGGATTCCTTCT 12176
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTT 82740
||| | || ||||| || ||||||||||
Sbjct 12175 TTAACCTGGATCTTGGCCTTTACATTTT 12148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 976525577349516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |