Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq393589 123 6e-23
seq258579 122 2e-22
seq336898 120 7e-22
seq364176 109 1e-18
seq414080 100 7e-16
seq397823 96.9 8e-15
>seq393589
Length=19132
Score = 123 bits (136), Expect = 6e-23
Identities = 151/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || ||||||| | | |||||| | | || ||| | || ||| | |||
Sbjct 7860 AAGACCCTGACAGGAAGACC-ATCACTCTCAAGGTTGAACCCTTGGATACAATAGAAAAT 7918
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || |||||||||| || ||| |||||||| |||||
Sbjct 7919 GTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGCAAAGACTGATCTTT 7978
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || |||||
Sbjct 7979 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 8038
Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389
||||||| ||||| ||||||||||
Sbjct 8039 GCTCTTCATCTTGTGTTGAGACTTC 8063
Score = 91.5 bits (100), Expect = 3e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
|||||||||| ||||| ||||||| ||||| || || | || ||||||| |||||| |
Sbjct 8063 GAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 8004
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||||||| ||||| || || ||||| || | ||| ||
Sbjct 8003 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 7961
>seq258579
Length=20613
Score = 122 bits (134), Expect = 2e-22
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || |||||| | || || ||| || || || | |||
Sbjct 18984 AAGACCCTGACGGGGAAGACCATCACTCTTGAGGTCGAACCCTCGGATGCAATAGAAAAT 19043
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||||||| || ||| |||||||| |||||
Sbjct 19044 GTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTT 19103
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | | |||| | || |||||||| || || |||||
Sbjct 19104 GCAGGCAAGCAACTGGAAGATGGACGTATTTTGTCTGACTACAACGTTCAAAAGGAGTCC 19163
Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389
||||||| ||||| ||||||||||
Sbjct 19164 GCTCTTCATCTTGTGTTGAGACTTC 19188
Score = 91.5 bits (100), Expect = 3e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
|||||||||| ||||| ||||||| ||||| || || || || ||||||| |||| | |
Sbjct 19188 GAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATAC 19129
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||||||| ||||| || || ||||| || | ||| ||
Sbjct 19128 GTCCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTG 19086
>seq336898
Length=33758
Score = 120 bits (132), Expect = 7e-22
Identities = 158/218 (72%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || | || || || ||||| | | |||||| | || || ||| || ||
Sbjct 29651 CAGATTTTCTTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCGGAT 29710
Query 206233 ACAGTCGAATCA-GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | ||| | |||||| |||| || || || ||||||||| || ||| ||
Sbjct 29711 ACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCAGCA 29770
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| ||| ||||| || || ||||| ||||||||||| | |||||| | || |||||| |
Sbjct 29771 AACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACAT 29830
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389
|| || |||||||||||||| ||||| |||||||||
Sbjct 29831 TCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACTTC 29868
Score = 93.3 bits (102), Expect = 1e-13
Identities = 77/94 (82%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
||||||||| ||||| |||||||||||||| || || | || ||||||| |||||| |
Sbjct 29868 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 29809
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
|||||||||||| ||||| || || ||||| ||
Sbjct 29808 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 29775
>seq364176
Length=18321
Score = 109 bits (120), Expect = 1e-18
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || |||||| | || || ||| | || ||| |||
Sbjct 5550 AAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTTGGATACAACAGAAAAT 5491
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
||||| ||||| || || || ||||||||| || ||| |||||||| |||||
Sbjct 5490 GTAAACGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTT 5431
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || ||||| || || |||||
Sbjct 5430 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCACAACACTCAAAAGGAGTCC 5371
Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389
|||||||| ||||| ||||||||||
Sbjct 5370 ACTCTTCATCTTGTGTTGAGACTTC 5346
Score = 87.8 bits (96), Expect = 4e-12
Identities = 81/103 (79%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
|||||||||| ||||| |||||||| ||||| || || || | ||||| |||||| |
Sbjct 5346 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTAC 5405
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||||||| ||||| || || ||||| || | ||| ||
Sbjct 5406 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 5448
>seq414080
Length=5684
Score = 100 bits (110), Expect = 7e-16
Identities = 138/190 (73%), Gaps = 6/190 (3%)
Strand=Plus/Plus
Query 206203 ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA-GTAAAGCAAAAGATTCA 206261
|| |||||| | ||||| ||| || || ||| ||| | |||||| ||||| ||
Sbjct 4556 ACCATCACTCTTGAAGTTGAACCCTCAGATACAACAGAAAAATGTAAAGGTCAAGATCCA 4615
Query 206262 AGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGA 206321
|| || ||||||||| || ||| |||||||| ||||| || || ||||| ||||
Sbjct 4616 GGATAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGA 4675
Query 206322 AGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCT-TGTTT 206380
||||||| | ||||| || |||||| | || || ||||| |||||||| || | |
Sbjct 4676 AGATGGATGTACTTT----GACTACAACATTCAAAAGGAGTCCACTCTTCATCTAAATGT 4731
Query 206381 TGAGACTTCG 206390
||||||||||
Sbjct 4732 TGAGACTTCG 4741
>seq397823
Length=5921
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || | || ||||| || || |||||| | || || ||| || ||
Sbjct 1890 CAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTCGGAT 1831
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| ||| ||||| ||||| ||||| || |||| |||| | || |||
Sbjct 1830 ACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCAGCAA 1771
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || || || || ||||| ||||||||||| | |||||| | || ||||||
Sbjct 1770 GGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACAGT 1711
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || ||||| |||||||| ||| | |||||||||||
Sbjct 1710 CAAAAGGAGTCCACTCTTCATCTTCTGTTGAGACTTCG 1673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1175439261657924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |