Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq194217 113 1e-21
seq369151 107 6e-20
seq368340 107 6e-20
seq248719 104 7e-19
seq224807 104 7e-19
seq374658 100 9e-18
seq379571 98.7 3e-17
seq345600 98.7 3e-17
seq236097 98.7 3e-17
seq222990 98.7 3e-17
seq392092 78.8 3e-11
>seq194217
Length=5192
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2325 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 2266
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 2265 CCGGGTTTCAGC 2254
>seq369151
Length=53501
Score = 107 bits (118), Expect = 6e-20
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 34136 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 34077
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 34076 TCCCGGGTTTCGGC 34063
>seq368340
Length=52914
Score = 107 bits (118), Expect = 6e-20
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 20563 GCTGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 20504
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 20503 CCGGGTTTCAGC 20492
>seq248719
Length=11737
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1687 GCTGAAATAGCTCAGTTGGGAGAGAGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1628
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 1627 CCGGGTTTCAGC 1616
>seq224807
Length=51481
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 10097 GCTGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 10038
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 10037 CCGGGTTTCGGC 10026
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 29039 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 29098
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 29099 TCCCGGGTTTCGGC 29112
Score = 78.8 bits (86), Expect = 3e-11
Identities = 62/73 (85%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGA-AGATCTAAAGGTCCCTGGTTCAAC 2827
|| ||| ||||| || ||||| ||| ||||||||| |||||||||||||||||||||||
Sbjct 3786 GCCGAAATAGCTTAGCTGGGAAAGCGTTAGACTGATAGATCTAAAGGTCCCTGGTTCAAT 3845
Query 2828 CCCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 3846 TCCGGGTTTCGGC 3858
>seq374658
Length=61323
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 55697 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 55756
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 55757 CCCGGGTTTCGGC 55769
>seq379571
Length=14588
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 5137 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5196
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5197 CCGGGTTTCGGC 5208
>seq345600
Length=24211
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 11478 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11419
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 11418 CCGGGTTTCGGC 11407
Score = 91.5 bits (100), Expect = 5e-15
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835
|||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||| |
Sbjct 16920 TAGCTCAGTTGGGAGACCATTAGACTGAACATCTAAAGGTCCCTGGTTCGATCCCGGGTT 16861
Query 2836 TCAGC 2840
|| ||
Sbjct 16860 TCGGC 16856
>seq236097
Length=20671
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 16927 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 16868
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 16867 CCGGGTTTCGGC 16856
>seq222990
Length=16942
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 5550 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5609
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5610 CCGGGTTTCGGC 5621
>seq392092
Length=51474
Score = 78.8 bits (86), Expect = 3e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| | |
Sbjct 51206 GCTGAAATAGCTTGGTTGTGAGAGCCTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATC 51147
Query 2829 CCGGGCTT 2836
| ||| ||
Sbjct 51146 CTGGGTTT 51139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15776540575380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |