Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq194217 113 1e-21 seq369151 107 6e-20 seq368340 107 6e-20 seq248719 104 7e-19 seq224807 104 7e-19 seq374658 100 9e-18 seq379571 98.7 3e-17 seq345600 98.7 3e-17 seq236097 98.7 3e-17 seq222990 98.7 3e-17 seq392092 78.8 3e-11 >seq194217 Length=5192 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2325 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 2266 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 2265 CCGGGTTTCAGC 2254 >seq369151 Length=53501 Score = 107 bits (118), Expect = 6e-20 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 34136 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 34077 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 34076 TCCCGGGTTTCGGC 34063 >seq368340 Length=52914 Score = 107 bits (118), Expect = 6e-20 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 20563 GCTGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 20504 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 20503 CCGGGTTTCAGC 20492 >seq248719 Length=11737 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1687 GCTGAAATAGCTCAGTTGGGAGAGAGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1628 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 1627 CCGGGTTTCAGC 1616 >seq224807 Length=51481 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 10097 GCTGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 10038 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 10037 CCGGGTTTCGGC 10026 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 29039 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 29098 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 29099 TCCCGGGTTTCGGC 29112 Score = 78.8 bits (86), Expect = 3e-11 Identities = 62/73 (85%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGA-AGATCTAAAGGTCCCTGGTTCAAC 2827 || ||| ||||| || ||||| ||| ||||||||| ||||||||||||||||||||||| Sbjct 3786 GCCGAAATAGCTTAGCTGGGAAAGCGTTAGACTGATAGATCTAAAGGTCCCTGGTTCAAT 3845 Query 2828 CCCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3846 TCCGGGTTTCGGC 3858 >seq374658 Length=61323 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 55697 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 55756 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 55757 CCCGGGTTTCGGC 55769 >seq379571 Length=14588 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5137 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5196 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5197 CCGGGTTTCGGC 5208 >seq345600 Length=24211 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 11478 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11419 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11418 CCGGGTTTCGGC 11407 Score = 91.5 bits (100), Expect = 5e-15 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||| | Sbjct 16920 TAGCTCAGTTGGGAGACCATTAGACTGAACATCTAAAGGTCCCTGGTTCGATCCCGGGTT 16861 Query 2836 TCAGC 2840 || || Sbjct 16860 TCGGC 16856 >seq236097 Length=20671 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 16927 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 16868 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 16867 CCGGGTTTCGGC 16856 >seq222990 Length=16942 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5550 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5609 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5610 CCGGGTTTCGGC 5621 >seq392092 Length=51474 Score = 78.8 bits (86), Expect = 3e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| | | Sbjct 51206 GCTGAAATAGCTTGGTTGTGAGAGCCTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATC 51147 Query 2829 CCGGGCTT 2836 | ||| || Sbjct 51146 CTGGGTTT 51139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15776540575380