Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 95.1 1e-14
seq411564 91.5 1e-13
seq418776 87.8 2e-12
seq393589 84.2 2e-11
>seq258579
Length=20613
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
|||||||| | ||| | | ||||||||||| |||||| || | ||| | || |
Sbjct 19183 CTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGTCCA 19124
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| ||||| ||||| || ||||| |||| | |||||||| | ||||| | ||||||
Sbjct 19123 TCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 19064
Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701
||| |||||| ||| | | || | | | || | ||| ||||| | |||||
Sbjct 19063 TCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTGATG 19004
Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || ||||||| || ||||| || ||||||||
Sbjct 19003 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 18969
>seq411564
Length=61085
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || |||| |||||||| || || |||||
Sbjct 40478 CTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTCCAGCTGTTTGCCTGCAAA 40537
Query 35605 TATCAACCGCTGCTGGTC--CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA 35662
|| | || ||||||||| | || | || ||||| ||| |||||| ||||| |
Sbjct 40538 GATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 40597
Query 35663 GTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722
| | ||||| || | |||||||||| ||||| || || ||||||| || |||
Sbjct 40598 TTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 40657
Query 35723 ACAAATATCTGCAT 35736
| || ||||||||
Sbjct 40658 CCGAAGATCTGCAT 40671
>seq418776
Length=96061
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || | | || |||||||| || || |||||
Sbjct 55070 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGTTTGCCTGCAAA 55011
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||| ||| | || | || ||||| ||| |||||| ||||| | |
Sbjct 55010 GATAAGCCTCTGCTAGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 54951
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || || |||||||||| ||||| || || | ||| || |||||
Sbjct 54950 CTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTGCNNNTCAGGGTCTTCAC 54891
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 54890 GAAGATCTGCAT 54879
>seq393589
Length=19132
Score = 84.2 bits (92), Expect = 2e-11
Identities = 155/226 (69%), Gaps = 1/226 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||| | | |||||||| | ||| | | |||||||||||||||||| || | |
Sbjct 8070 CCACCATGAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGAC 8011
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| ||||| || ||||| |||| | |||||||| | | |
Sbjct 8010 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAA 7951
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| |||||| ||| | | || | | || || | ||| |||
Sbjct 7950 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACC 7891
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
| | ||||| || || || |||| || |||| || |||||||
Sbjct 7890 TTGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCATGAAAATCTGCA 7846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448418796775520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |