Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 89.7 5e-13
seq359707 87.8 2e-12
seq397823 82.4 8e-11
>seq258579
Length=20613
Score = 89.7 bits (98), Expect = 5e-13
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || | ||| |||||||||| ||||||||| | ||| | |
Sbjct 19186 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAA-TACG 19128
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||||||||| |||| | ||||| || || || || |||||
Sbjct 19127 TCCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 19068
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | || || || | ||| || || |||||
Sbjct 19067 CTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGT 19008
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | || || |||||||| ||||| |||
Sbjct 19007 GATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATTG 18965
>seq359707
Length=5412
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || || | || ||||| || || || || || || ||| |||| || |
Sbjct 2566 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAA 2625
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
||||| || || ||||||||||||||||| || | | |||||| || || ||
Sbjct 2626 GGAGTGTGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 2685
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||||||||| || || || || || || | | ||||| || |||||
Sbjct 2686 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGACTCCACC 2745
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || || || || || || ||||| || |||||||||
Sbjct 2746 TCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATTTTG 2796
>seq397823
Length=5921
Score = 82.4 bits (90), Expect = 8e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| ||||| || || || ||||| ||||||||| |||||||||| | ||| | | |
Sbjct 1676 AGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGACTGTTGTAGTCAGACAAAG-TACG 1734
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||||||||| | ||||| | | || || ||||
Sbjct 1735 TCCATCTTCCAGTTGCTTGCCAGCAAAAATCAATCCTTGCTGGTTAGAAGGAATTACTTC 1794
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| ||||| || || || || || ||| || || | ||| || ||||||||
Sbjct 1795 CTTATCTTGGATCTTGGCGTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGT 1854
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | | || || ||||| |||||
Sbjct 1855 GATGGTCTTCCCTGTCAGGATCTTCACAAAAATCTGCAT 1893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502735935958880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |