Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq245831 140 5e-28 >seq245831 Length=393 Score = 140 bits (154), Expect = 5e-28 Identities = 206/292 (71%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 213932 TATGGCGAGACGCTGGAAAAACAGCACCAGTTGCGTCTGTTCAAGGACGGTAAAATGAAG 213991 ||||| || | |||| | |||||| | |||| || | ||||| || |||||||| Sbjct 52 TATGGTGAATCTTTGGAGAGACAGCATAAACTGCGCCTTTCAAAGGATGGAAAAATGAAA 111 Query 213992 TACCAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATG 214051 || ||||| |||| || || | || ||||| || ||||| || | | || | ||| Sbjct 112 TATCAGATAATTGGTGGCGAGATGTATCCTCCCACAGTCAAAGATACTCAGGTCGAGATG 171 Query 214052 GTTTACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGA 214111 | ||| || ||||| ||| | | || || || |||| | || | ||||| Sbjct 172 ATCTACCCCCCTCATGTTCCTGAACACCTGCGGTTTGCTGTGGGGCAGGAAGTCTTTGGT 231 Query 214112 CTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGC 214171 || ||||| ||| | ||| ||||||||| || |||||| | || || ||||| || || Sbjct 232 CTGGTGCCTGGTCTGATGATGTACGCCACAATTTGGCTGCGGGAACATAACAGAGTGTGT 291 Query 214172 GACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 || ||||| ||||| ||||| || |||||| |||| || ||||||||||||| Sbjct 292 GATGTGCTTAAACATGAGCATCCAGAATGGGACGATGAGCAGCTGTTCCAGA 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 719530204498560