Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 428 6e-115
seq404197 336 3e-87
seq418289 129 8e-25
seq327453 123 3e-23
seq196131 120 4e-22
seq265909 111 2e-19
seq400361 107 3e-18
seq346476 89.7 7e-13
>seq366024
Length=42324
Score = 428 bits (474), Expect = 6e-115
Identities = 660/935 (71%), Gaps = 10/935 (1%)
Strand=Plus/Minus
Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCT---TGTGACATAACTCCCATTT 39326
||| |||||| |||| || | ||| ||| ||| || || ||||| |||| |||
Sbjct 18402 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCAGACTG-GACATCACTCTCATCC 18344
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || || || || | ||||| | || ||||| || ||||||| ||| ||||| |
Sbjct 18343 TCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 18284
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
|||| || ||||| ||||| | | | | || |||| || | || || |
Sbjct 18283 CCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCCGCATAA 18224
Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506
||| ||||| || ||||| ||||| ||||||| |||||||| || ||||| |
Sbjct 18223 GTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAAAGTGCAATTCATCCCAATGAGCT 18164
Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTA-CGGCCTCTGTTATTATC 39565
| ||||| || || ||||| || ||||| | ||| || |||| | || | |||||
Sbjct 18163 TCACTGGCAGGGCATCCGTGAGGAACTCCTGTTCTAT-TCTAACTGCATTGACGATTATT 18105
Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625
|| | ||| || || ||| || | | ||||| || || | |||||| |||
Sbjct 18104 TATTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAATATCAGGCAGGCAAAG 18045
Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685
||||| |||| ||||| ||||| ||||| | ||| || ||||||||||| || || ||
Sbjct 18044 TCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGTATC 17985
Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745
||||| || ||||||||||| ||||| | |||||||| |||||||||||||| |||||
Sbjct 17984 AGACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCC 17925
Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTC 39802
||||| ||||| || || | | ||||| || | | || || | ||||| |
Sbjct 17924 ACTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCTCTTTGTCCCCGATCCAGCAC 17865
Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862
|||||||| || ||||||||||||||||||||||| || ||||| || |||||| |
Sbjct 17864 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGAAAT 17805
Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922
| |||| | |||||||| || || || || | |||||||||||||| ||||||
Sbjct 17804 TCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGG 17745
Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982
|||||||| || || || | || || || ||||| | ||||| ||||| || || |||
Sbjct 17744 ATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 17685
Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042
| ||| ||| |||| |||||||| ||||| |||||||| || ||||| || |||
Sbjct 17684 TGGCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCC 17625
Query 40043 AATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCT 40102
| | ||| ||| |||||| | || || || ||| | ||||| | || ||
Sbjct 17624 AGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 17565
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| || | || || ||||||||||||||||| || ||||| || || || ||||| | |
Sbjct 17564 TTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGC 17505
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|| |||||| | |||| || ||||| || |||||
Sbjct 17504 CAAATATCATGGTATTTGATAGGAAAGATGACAAA 17470
>seq404197
Length=65104
Score = 336 bits (372), Expect = 3e-87
Identities = 632/925 (68%), Gaps = 8/925 (1%)
Strand=Plus/Minus
Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCT---TGTGACATAACTCCCATTT 39326
||| |||||| |||| || | ||| ||| ||| || || ||||| ||||||||
Sbjct 53125 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTG-GACATCACTCCCATCC 53067
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || || || || | ||||| || || ||||| || ||||||| ||| |||| |
Sbjct 53066 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAACTATTCT 53007
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
|||| || ||||| ||||| | | | | || |||| || | || || |
Sbjct 53006 CCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCAGCATAA 52947
Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506
||| ||||| | |||| ||||| ||||||| | |||||||| || ||||| |
Sbjct 52946 GTCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCGCAATTCATCCCAATGAGCT 52887
Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566
| |||| | |||||||| || ||||| | ||| || || || | || ||
Sbjct 52886 TCACTGTCGGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACTGCATTGACGATAATTT 52827
Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626
| | ||| || || ||| || | | ||||| ||||| | | |||| ||||
Sbjct 52826 CTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCAGGAAGGCAAAGT 52767
Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686
|||| |||| ||||| ||||| ||||| | ||| || ||||||||||| || ||||| |
Sbjct 52766 CACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCA 52707
Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746
| || | || |||||||| ||||| | |||||||| |||||||||||||| ||||| |
Sbjct 52706 GTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCA 52647
Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTCT 39803
|||| ||||| || || | | || || ||| || | || || | ||||| |
Sbjct 52646 CTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGCCTCTTTGTCCTCGATCCAGCGCA 52587
Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863
|||||||| || ||||||||||||||||||||||| || || || || |||||| | |
Sbjct 52586 AGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATGGCGTTGAAGAGAAATT 52527
Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923
|||| | ||||| || || || || || | |||||||||||||| ||||| |
Sbjct 52526 CCCTTTCTTTGGAATCTTGAATGTAAGTGTCAATGAGGAGACTATACATTTCCGAATGTA 52467
Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983
||||||| || || || || || || || ||| | ||||| ||||| || || |||
Sbjct 52466 TGTTTTCCATGGCGATTTGGAAGCCATAGAAATAATGGGCTTCCGTAATCTGAACTTCTT 52407
Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043
| || | ||| ||| |||||||| |||| || ||||| || ||| | || | ||
Sbjct 52406 GGCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCGTCACTTGCTGCAGAGAAAGGCA 52347
Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103
||||| | | |||||| | || || || ||| | || || | || || |
Sbjct 52346 GGACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCGGTGCTGAATGTCCT 52287
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163
| || | || || || ||||| ||||| || || ||||| || || || |||| | ||
Sbjct 52286 TGGAAAGGTCCACCTCCTCAGCCGTCCAGAAGGAAGCCTCAGCGTTCTTACACATCTGCC 52227
Query 40164 ATATATCACGATATTGTATTGGAAA 40188
| |||||||| ||| || |||||
Sbjct 52226 AAATATCACGGTATCCGATAGGAAA 52202
>seq418289
Length=29330
Score = 129 bits (142), Expect = 8e-25
Identities = 103/124 (83%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||| ||||| ||||| | ||| || ||||||||||| || ||||| ||||| || ||||
Sbjct 26792 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGACCTCGTTTTT 26733
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
||||||| ||||| | |||||||| |||||||||||||| ||||| ||||| ||||| |
Sbjct 26732 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 26673
Query 39759 CAAC 39762
| ||
Sbjct 26672 CTAC 26669
Score = 84.2 bits (92), Expect = 3e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936
|||||||| || || || || | |||||||||||||| |||||||||||||| || ||
Sbjct 24796 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGGATGTTTTCCATGGC 24737
Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982
|| || || || || ||||| | ||||| ||||| || || |||
Sbjct 24736 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 24691
>seq327453
Length=26950
Score = 123 bits (136), Expect = 3e-23
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| || || || ||||| |||||||| || ||||||||||| ||||| | ||
Sbjct 17788 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGTTCAATTGAC 17847
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
||||||||||||| || ||||||||||| ||||| ||||| || || | | ||||||
Sbjct 17848 TCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAACTG 17907
Query 68839 TTTCTAAGACCAT 68851
||||| | |||||
Sbjct 17908 TTTCTTATACCAT 17920
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| |||||||| |||||||| || |||||| ||| | || || || ||||| || |
Sbjct 15556 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 15615
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
||| || || |||||||| |||||||||||||| || || ||||| || | | | |
Sbjct 15616 TCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGTACGGTTT 15675
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611
| |||| |||||||| | ||||||| ||| || || | ||||| ||||
Sbjct 15676 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 15726
>seq196131
Length=2042
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390
|| |||| |||| ||| |||||||| ||||| || || || | ||| || || ||||| |
Sbjct 1357 CACCACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCGATCCTTGCTGCCA 1298
Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450
| || ||||||||||| || | ||||| | || || ||| |||| ||||| || ||||
Sbjct 1297 GGATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTAT 1238
Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| ||| | ||| || || || | |||| ||||| || ||||||||||
Sbjct 1237 CTAGTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 1187
>seq265909
Length=7629
Score = 111 bits (122), Expect = 2e-19
Identities = 237/350 (68%), Gaps = 7/350 (2%)
Strand=Plus/Minus
Query 37354 GATCCAAACCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCATTCAGATCA 37413
|| ||||| ||| | || || || || |||||| | ||| ||||| | | ||
Sbjct 2353 GAACCAAAACCTCCTGAACCCCTTTCAGTGTCATCTAAAACTTGAACTTCCTCTATTTCT 2294
Query 37414 GGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTTATTTTAAAA 37473
|| ||| |||| |||| | | || ||||| || |||| ||| || | || | || |||
Sbjct 2293 GGGTAAAATATCCGTTCACAAATGAGCTGTGCAATTCGATCATCCTTTTTGACTTCAAAC 2234
Query 37474 TTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCTTCATCGATT 37533
|| ||| ||| ||| | ||| | || |||| | | || |||||||||||||| ||
Sbjct 2233 TTTTCTTTGCCAAAATTAAACAGTACAACACCAACACTTCCTCTATAATCTTCATCTATG 2174
Query 37534 ACTCCGCCTCCTACATCAAT---ACCTTTTAGAGACAAACCCGATCTAGGAGCTATTCTT 37590
|| || |||||||||| || |||| || ||| || || | ||||||| |||
Sbjct 2173 ACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGGAGCTACTCTC 2114
Query 37591 CCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATTGTCTTTCTCC- 37649
||||| || || | || ||| |||| |||||||| | ||| | ||||||||
Sbjct 2113 CCATAGCACCCAGAAGGAAGAGCTATCTGAATGTCTGTTTTCA-CAA-GGGCTTTCTCCA 2056
Query 37650 -AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATATCCCGCGGCA 37698
||| | | || ||||| || || | |||| ||||| |||||||||
Sbjct 2055 TAGGTGGCACTGTGTAATCATAGGCACCGTATAGGTCATAGCCCGCGGCA 2006
>seq400361
Length=55729
Score = 107 bits (118), Expect = 3e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | ||| || ||||| || ||||||||||| || || | || ||
Sbjct 38422 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCTTT 38481
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||
Sbjct 38482 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 38541
Query 39761 AC 39762
||
Sbjct 38542 AC 38543
Score = 86.0 bits (94), Expect = 9e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 39428 AATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCA 39487
||||| | |||||||| |||||| || || |||||||| || || |||||||| ||
Sbjct 28148 AATCCAAGTTCTGAAAGCAATCTGTCAGCTACAAATTCAATATACTGTTTCATCAAAACA 28207
Query 39488 CAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTC 39534
||||||||||| ||||| |||||| | || || |||| ||||||
Sbjct 28208 CAATTCATTCCGATGAGGCCAACTGGCAAGGCTTCTGTTAAAAACTC 28254
>seq346476
Length=8320
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || ||||| || | || ||||| || || || ||||| || |||||||| || |||
Sbjct 4620 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 4679
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|||||||||||||| | || ||||| | ||||| || | | || | |||||||
Sbjct 4680 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATGCCCACAGATACCCTCATCAAC 4739
Query 70111 ATATGCTGAGGTCGTTC 70127
|||||||| |||| |||
Sbjct 4740 ATATGCTGTGGTCTTTC 4756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 683290130096160
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