Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 282 3e-71
seq404197 196 4e-45
seq379991 132 4e-26
seq418289 107 2e-18
seq275938 102 6e-17
seq400361 86.0 5e-12
>seq366024
Length=42324
Score = 282 bits (312), Expect = 3e-71
Identities = 611/902 (68%), Gaps = 28/902 (3%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | ||||| || |||| ||||| || ||||| ||||| || ||||| ||||
Sbjct 17470 TTTGTCATCTTTCCTATCAAATACCATGATATTTGGCAGATGTATAAGAAAGCTGAGGCT 17529
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817
|| ||||||||||| ||||| || || | | || ||| | ||||| ||| ||
Sbjct 17530 TCCTTTTGGACAGCTGAAGAGGTGGACCTTTCCAAGGACATTCAGCAC--TGGGAAGCCC 17587
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
| || || | || | | |||| || || || |||| || ||||| || || || |
Sbjct 17588 TGAAGCCTGAGGAGAGATATTTCATTTCGCATATTCTGGCTTTCTTTGCAGCAAGTGATG 17647
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936
| ||||| |||||||| ||||| | |||| ||||||||||| |||| | |||||
Sbjct 17648 GCATAGTAAATGAAAACTTGGTGGAGCAGTTTAGCCAAGAAGTTCAGATTA-CGGAAGCC 17706
Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996
|| ||||| ||||| || | ||||||||| ||||| || ||||| |||||||| |||||
Sbjct 17707 CGTTGTTTCTATGGCTTCCTAATTGCCATGGAAAACATCCATTCTGAAATGTATAGTCTC 17766
Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
|| || || || ||||| |||||| | || | | | | || || || || ||
Sbjct 17767 CTCATTGACACTTACATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGCTATTGAG 17826
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
||| | ||| | || | || ||||| |||||| | ||||| | | |
Sbjct 17827 ACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGTGCTGGATCGGGGACAAAGAG 17886
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | | ||||||||| | || || ||||| | |||||||| || |||||||| ||
Sbjct 17887 GCTACGTATGGAGAACGTTTCGTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGT 17946
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| | ||||| ||| | || ||||||||| |||| || || | || |||||
Sbjct 17947 TCTTTTGCATCGATATTCTGGCTCAAAAAACGAGGTCTGATACCCGGCCTCACATTTTCC 18006
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||||| | || || | || || || ||||| || || ||||| ||| || || | |
Sbjct 18007 AATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATATTCAAA 18066
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
| || | || | || ||||| ||| | | | | | || | || | |||||
Sbjct 18067 CACCT--GCTAC-ACAAACCTTCGGAGCAGAGAGTCAAATAAATAATCGTCAATGCAGTT 18123
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
| |||||||| || || | || || | || || || | || || ||||| ||
Sbjct 18124 AGAATAGAACAGGAGTTCCTCACGGATGCCCTGCCAGTGAAGCTCATTGGGATGAATTGC 18183
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTT---GGAACTGGG 44469
|| ||||||||| || || || |||| | | ||||| | |||| | ||| |||||
Sbjct 18184 AC-TTTGATGAAGCAGTACATCGAATTCGTGGCAGACAG---ACTTATGCGGGAGCTGGG 18239
Query 44470 TTGCGATAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGT 44525
|| | | || | || ||| |||| || ||||| |||||||| ||||||||
Sbjct 18240 TT----TTAGCAAGGTTTTCAGAGTAGAAAATCCATTTGACTTTATGGAGAATATTTCAC 18295
Query 44526 TGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCA 44585
||||||| || || ||||| | ||| || | || || || |||||| | ||| | || |
Sbjct 18296 TGGAAGGGAAGACTAACTTCTCTGAGAAGAGAGTAGGCGAGTATCAGAGGATGAGAGTGA 18355
Query 44586 TG 44587
||
Sbjct 18356 TG 18357
>seq404197
Length=65104
Score = 196 bits (216), Expect = 4e-45
Identities = 586/896 (65%), Gaps = 20/896 (2%)
Strand=Plus/Plus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| | ||||| || ||| | ||| || ||||| |||| || || || |||| ||
Sbjct 52195 TGTCTTCTTTCCTATCGGATACCGTGATATTTGGCAGATGTGTAAGAACGCTGAGGCTTC 52254
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCATTA 43819
|| ||||| || || || || || | | || ||| | ||||| | | || |
Sbjct 52255 CTTCTGGACGGCTGAGGAGGTGGACCTTTCCAAGGACATTCAGCACCGGGAA--GCCCTG 52312
Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879
|| || | || | | |||| | || || || | || | ||| || || |||||
Sbjct 52313 AAGCCTGAGGAGAGATATTTCACTTCGCATGTCCTGCCTTTCTCTGCAGCAAGTGACGGC 52372
Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACG 43938
|||| |||||||| |||| ||| || ||||||||||| |||| | ||||| |
Sbjct 52373 GTAGTAAATGAAAACCTGGTGGAGCGGCTTAGCCAAGAAGTTCAGATTA-CGGAAGCCCA 52431
Query 43939 ATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCT 43998
| ||| ||||| || ||||| ||||| ||||| || |||||||||||||| ||||| ||
Sbjct 52432 TTATTTCTATGGCTTCCAAATCGCCATGGAAAACATACATTCGGAAATGTATAGTCTCCT 52491
Query 43999 GATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAAC 44058
|| || || ||||| ||||| | || | | | | || || || || || ||
Sbjct 52492 CATTGACACTTACATTCAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGCCATTGAGAC 52551
Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTC 44118
| | ||| | || | || ||||| |||||| | ||||| | || || |
Sbjct 52552 AATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATCGAGGACAAAGAGGC 52611
Query 44119 T---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175
| | || | || | || || ||||| | |||||||| || |||||||| || ||
Sbjct 52612 TAGGTACTGAAAGCGTGTCGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTC 52671
Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235
||||| | ||||| ||| | |||||| |||| ||||||| || | || ||||| ||
Sbjct 52672 TTTTGCATCGATATTCTGGCTCAAGAAATGAGGACTGATGCCCGGCCTCACATTTTCCAA 52731
Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATA 44295
||| | || || | || || || ||||| || || ||||| | | || | | | |
Sbjct 52732 TGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTTCCTGATGTTCAAACA 52791
Query 44296 TCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAA 44355
|| | || | || ||||| ||| | | | ||| ||| | || | ||||| |
Sbjct 52792 CCT--GCTAC-ACAAACCTTCGGAGCAGAGAGTCAAAGAAATTATCGTCAATGCAGTTAG 52848
Query 44356 GATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACT 44415
||||||||| || || | || || | || || | || || ||||||
Sbjct 52849 GATAGAACAGGAGTTCCTCACGGAGGCCCCGACAGTGAAGCTCATTGGGATGAATTGCGC 52908
Query 44416 TTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGA 44475
||||||||| || || || ||| | | ||||| | | | |||| |||||||
Sbjct 52909 TTTGATGAAGCAGTACATCAAATTCCTGGCAGACAGACTTATGCTGGAGCTGGGTT---- 52964
Query 44476 TAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAG 44531
| | || | || ||| |||| || ||||| |||||||| |||| ||| ||||||
Sbjct 52965 TTAGCAAGGTTTTCAGAGTAGAAAATCCATTTGACTTTATGGAGAATAGTTCACTGGAAG 53024
Query 44532 GCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
| || || ||||| ||||| || | || || || |||||| | ||||| || |||
Sbjct 53025 GGAAGACTAACTTCTTTGAGAAGAGAGTAGGCGAGTATCAGAGGATGGGAGTGATG 53080
>seq379991
Length=26627
Score = 132 bits (146), Expect = 4e-26
Identities = 179/248 (72%), Gaps = 1/248 (0%)
Strand=Plus/Minus
Query 47201 CATTGGTTTTA-CAACGTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATT 47259
|| |||||| | || ||| | || ||||||||| | ||| | ||| | || ||| | |
Sbjct 24772 CAGTGGTTTCATCAGTGTGCTACAGTTTTTAGGATTATATAAGAAAACTGGTAAATTGGT 24713
Query 47260 ATTTCTCGGGTTAGACAATGCAGGAAAAACGGCATTACTCCACATGCTCAAATACAATTG 47319
|||||| || || || |||| |||||||| |||| || |||||||| ||| || |
Sbjct 24712 ATTTCTTGGATTGGATAATGTGGGAAAAACAACATTGCTACACATGCTAAAAGTTGATGG 24653
Query 47320 CATGAAAGAGCATAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCAT 47379
| | | ||| ||| | |||||||| || || ||| ||||||| |||||||||||
Sbjct 24652 ACTTGGACAACATGTCCCAATGTTACATCCCACTTCAGAAGAACTAACCATTGCTGGCAT 24593
Query 47380 AACATTTAGCACATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTA 47439
|| |||| || |||||| | || ||||| ||||||| || ||| ||||| |||| ||
Sbjct 24592 GACCTTTACAACTTTTGATCTGGGTGGACATGTTCAAGCTCGAAGAGTGTGGAAAAACTA 24533
Query 47440 TTTTCATG 47447
||| ||
Sbjct 24532 CCTTCCTG 24525
>seq418289
Length=29330
Score = 107 bits (118), Expect = 2e-18
Identities = 96/118 (81%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|||||| ||||||||||| |||| | ||||| || ||||| ||||| || ||||||||
Sbjct 24680 CGGTTTAGCCAAGAAGTTCAGATTA-CGGAAGCCCGTTGTTTCTATGGCTTCCAAATTGC 24738
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
||| ||||| || ||||| |||||||| ||||| || || || || ||||| ||||||
Sbjct 24739 CATGGAAAACATCCATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGAT 24796
>seq275938
Length=4795
Score = 102 bits (112), Expect = 6e-17
Identities = 231/345 (67%), Gaps = 13/345 (4%)
Strand=Plus/Minus
Query 77341 GTCCAGCTTCATAAAGTCATCCTTGTTGA-CAACTGACCCTCCGCCATGCAG--CCTCCA 77397
|||||| | || ||||| || ||||||| || || ||| | | ||| ||||||
Sbjct 3145 GTCCAGTTCCACGAAGTCCTCTTTGTTGATCACCT---CCTTCCCTGTGCTTGTCCTCCA 3089
Query 77398 GCCGTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGCTGTC 77457
|| |||| ||||||| |||| ||||| | |||||||| || |||||||||||
Sbjct 3088 TCCATTCTTCTTCCAG-------CCCAATTAGTGATGCCATTGATAGTAAACATGCTGTC 3036
Query 77458 TGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGC 77517
|||||||| |||| ||| |||| || | ||| ||||||| | |||||| | ||
Sbjct 3035 TGTGTAGAGAACCAACTTACTGATGTTCTGAGCCTTCGCTTGTTCGATGGCTTTGCAGGC 2976
Query 77518 AGCCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAG 77577
|| || || || || | |||||||| ||| ||| ||||| | | ||||| |
Sbjct 2975 TGCATGAATCTCTGCTCTTTGGTTTGTTTGTCACCCAGTAAGTCTAATTCCTACATTTAA 2916
Query 77578 CGGGTGATTATAACCCCAATATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTTGA 77637
|| || ||||| || || || || || ||||| || |||| || ||
Sbjct 2915 AGGATGGCCTGGCCCCCAGTAAACACCGATTCCTGCTCGAGCCCCCCTCTGCCCATTACT 2856
Query 77638 TAAGCAACAGCCGTCAGTGTAGACCACCACGGCGTCACCCATGTA 77682
|||| |||||||| ||||||| | || | || ||||| ||
Sbjct 2855 GGAGCAGCAGCCGTCCTTGTAGACGATGACAGTTTCCCCCATATA 2811
>seq400361
Length=55729
Score = 86.0 bits (94), Expect = 5e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| || || || |||||||| || ||||| |
Sbjct 24292 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAGGGGAAAACAAATTTCTTTGAGA 24233
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 24232 AACGAGTTTCAGAGTATCAGCG 24211
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | |||||||| || || | |||||| ||| ||||||| ||| | ||||||||
Sbjct 46419 TTTGTCATCTTTCCAATCCAGTACCCTGACATTTGGAAAATGTATAAACAGGCACAGGCA 46360
Query 43760 TCATTTTGGACAGCAGAAGAAGT 43782
|| || |||||||||||||| ||
Sbjct 46359 TCCTTCTGGACAGCAGAAGAGGT 46337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395414527371220
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