Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq397970 131 1e-25
seq397969 84.2 2e-11
>seq397970
Length=5258
Score = 131 bits (144), Expect = 1e-25
Identities = 478/738 (65%), Gaps = 24/738 (3%)
Strand=Plus/Minus
Query 111563 AAATAGCAACATCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCA 111621
||| ||| | ||||| || |||| || ||||| | || || |||| | ||||||
Sbjct 2390 AAACAGCCATTTCCATTTTAATAGTCGGGTGAGGATTGTAGC-CTTCAATCTGAAAGTCT 2332
Query 111622 TCAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGG 111681
||||| || || ||||| ||||| |||| ||| | || || || || ||
Sbjct 2331 TCAGCCTTGAAGTCATCAATTTTCTCAACTTTTCGAAGGATTCTGAGCTTGGGGAAAGGC 2272
Query 111682 GTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCA 111741
| || | ||| |||||| | || | ||| |||||||| | |||| || |||
Sbjct 2271 CTTGGTTCTCGCTGAAGCTGAATTTTCAGCAGCTCAATGTGATTCAGGTAAATGTGTGCA 2212
Query 111742 TCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTAT 111801
||||| | | || | || || | |||| || || ||||||||||| ||||||||
Sbjct 2211 TCTCCCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGTGCGATCATGTA- 2153
Query 111802 GTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTT 111861
| || ||| || || ||||| || |||||||| |||||||||||||| || ||
Sbjct 2152 ----GCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCCATATCTCCTGACCTC 2097
Query 111862 TGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAA 111921
|| || ||||| || || || | | | ||| || || || ||||| | || ||
Sbjct 2096 TGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCGTGGCAC 2037
Query 111922 GGAGGCAATGCCATCCCATTCATA---AAGGGTCCCCATGCACACATGATCATCCTTCTG 111978
|| || | ||||| | | | || ||| ||||||| ||| || ||||||
Sbjct 2036 GGGGGTAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGATGATTCTTCTG 1977
Query 111979 CTGT-AGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACC 112037
|| || | | | || | ||| || | || || || || |||| |||| | |
Sbjct 1976 TCGTCAGGGTTGGTTTTGATTGT-GTCAGTCACTTTTTGCAGTTGATCTACTCCTTGATC 1918
Query 112038 AGTATAATCCGCCTGACATCCA-----GTGTATGTTGCCCCATAGTGTCTCCATTGGAAT 112092
| ||||| |||| ||||| ||||| |||||| | || ||||| || ||
Sbjct 1917 TGAATAAT----CTGA-ATCCATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAG 1863
Query 112093 CCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGA-AATTGCTCTCTATTCAACAA 112151
||||||| || || | ||| || ||| | |||| ||| | || | ||| ||
Sbjct 1862 CCATAAACTGGGCCTAAATCCCCTTCTGCTCT-GGTGGAGAATCCCAGGCTGTCCAAGAA 1804
Query 112152 ATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATT 112211
|| | || | || ||| || |||||||| || || || | ||| | || ||
Sbjct 1803 GTCTCGGGACCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTT 1744
Query 112212 TGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTT 112271
||||||||| | |||||||| ||||| || ||| ||| || || ||| | || | |||
Sbjct 1743 TGTGGATCCCTTGATAAACCACAGCAACTCCTCCGAAACACCCTTGCAGAAAACACGTTT 1684
Query 112272 AGTAGTTAGCAGTGGaaa 112289
|| || ||||| |||||
Sbjct 1683 GGTTGTCAGCAGAGGAAA 1666
>seq397969
Length=7843
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| ||||||||||| |||||||| ||||| || ||| || || ||||| || ||||||
Sbjct 7709 CCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACA 7650
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAG 111881
|| |||||||| ||||| || || || | ||||| || || ||
Sbjct 7649 CCCAGGCCCATGTCTCCTGACCTCTGGAACAGCTGGCAGGACAG 7606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 389932430707372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |