Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 95.1 1e-14
seq418289 89.7 6e-13
>seq366024
Length=42324
Score = 95.1 bits (104), Expect = 1e-14
Identities = 302/455 (66%), Gaps = 30/455 (7%)
Strand=Plus/Plus
Query 59980 AACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCT 60038
||||| || |||| ||||| ||| ||||||||||||||||| ||||| || || |
Sbjct 17900 AACGTTTCGTAGCCTTTGC-TGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCG 17958
Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098
|| |||||||||||||| || || || || || ||||| | || ||||| || || |||
Sbjct 17959 ATATTCTGGCTCAAAAAACGAGGTCTGATACCCGGCCTCACATTTTCCAATGAACTTATT 18018
Query 60099 TCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTC--ACACCTATTGG 60156
| | |||||||| | || || ||||| || | ||||| |||||| |
Sbjct 18019 AGCAGAGACGAGGGTTTACACTGTGACTTTGC-CTG-CCTGATATTCAAACACCTGCTAC 18076
Query 60157 AAAAATGCCCTTCCAAG--GATATTCA---CAAGATTGTTCAGTGGGCTTGTGAAGTGGA 60211
| ||| ||||| || || | ||| || | | ||| || || ||| | |
Sbjct 18077 ACAAA---CCTTCGGAGCAGAGAGTCAAATAAATAATCGTCAATGCAGTT-AGAATAGAA 18132
Query 60212 GAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGA--GAA 60269
|| |||||| |||| || || || ||| || ||||| || ||| | || |
Sbjct 18133 CAG-GAGTTCCTCACGGATGCCCTGCCAGTGAAGCTCATTGGGATGAA--TTGCACTTTG 18189
Query 60270 ATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATG-----GCCCAGTTTGGAGAAG 60324
|||| ||||||||| | || || || ||| | || ||| || |||| |||
Sbjct 18190 ATGAAGCAGTACATCGAATTCGTGGCAGACAGACTTATGCGGGAGCTGGGTTTTAGCAAG 18249
Query 60325 GACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGA 60384
| ||| | | || | || || || |||| ||||||| || || |||||||||
Sbjct 18250 G-----TTTTCAGAGTAGAAAATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGA 18304
Query 60385 AGACCAACTTCTTTGAGAAGCGGGTCGGGGATTAT 60419
|||| ||||||| ||||||| | || || || |||
Sbjct 18305 AGACTAACTTCTCTGAGAAGAGAGTAGGCGAGTAT 18339
>seq418289
Length=29330
Score = 89.7 bits (98), Expect = 6e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTA 60039
||||| || |||| ||||| ||||||||||||||||| ||||| || || | |
Sbjct 26661 AACGTGTCGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGA 26720
Query 60040 TTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTT 60099
| |||||||||||||| || || || ||||| ||||| | || ||||| || || |||
Sbjct 26721 TATTCTGGCTCAAAAAACGAGGTCTGATGCCCGGCCTCACATTTTCCAATGAACTTATTA 26780
Query 60100 CCCGGGACGAGG 60111
| | |||||||
Sbjct 26781 GCAGAGACGAGG 26792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545635143927360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |