Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 149 7e-31
seq364176 143 3e-29
seq393589 138 1e-27
seq336898 129 7e-25
seq397823 122 1e-22
seq414080 116 4e-21
seq129591 116 4e-21
seq168090 105 8e-18
seq366847 102 9e-17
seq80074 91.5 2e-13
seq260509 89.7 6e-13
seq418289 84.2 2e-11
>seq258579
Length=20613
Score = 149 bits (164), Expect = 7e-31
Identities = 165/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || || ||||| || ||||||||||| || |
Sbjct 18969 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTTGAGGTCGAACCCTCG 19028
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||| || | |||| | ||||| || || ||||||||||| ||||||||||| ||||||
Sbjct 19029 GATGCAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 19088
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| || |||||||| || |||| |||| | | ||||| ||
Sbjct 19089 CAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGACGTATTTTGTCTGACTACAAC 19148
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTC 27625
|| |||||||| ||| |||||||||| || ||| | ||||
Sbjct 19149 GTTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACTTC 19188
>seq364176
Length=18321
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || || ||||| || ||||| ||||| || |
Sbjct 5565 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTTG 5506
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| | | |||| | || || || || ||||| ||||| ||||||||||| ||||||
Sbjct 5505 GATACAACAGAAAATGTAAACGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 5446
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| |||||||| || |||| ||||| | | ||| | ||
Sbjct 5445 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCACAAC 5386
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| |||||||||||||| || ||| | |||| ||||||
Sbjct 5385 ACTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCACGGTGG 5339
>seq393589
Length=19132
Score = 138 bits (152), Expect = 1e-27
Identities = 167/226 (74%), Gaps = 1/226 (0%)
Strand=Plus/Plus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466
|||| || || | ||||| || || || ||||| || ||||| ||||||| | |
Sbjct 7846 TGCAGATTTTCATGAAGACCCTGACAGG-AAGACCATCACTCTCAAGGTTGAACCCTTGG 7904
Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526
||| || | |||| | ||||| || || ||||||||||| |||||| | || |||||||
Sbjct 7905 ATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 7964
Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586
| | || || |||||||| |||||||| || |||| ||||| | | ||||| ||
Sbjct 7965 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 8024
Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||| |||||||||| || ||| | |||| |||||
Sbjct 8025 TTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACTTCATGGTGG 8070
>seq336898
Length=33758
Score = 129 bits (142), Expect = 7e-25
Identities = 166/228 (73%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || | ||||| || || || | | | || ||||| |||||||| |
Sbjct 29648 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCG 29707
Query 27466 GATAGCATTGCAAATT-TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | ||| | | ||||| || | ||||||||||| ||||||||||| |||||
Sbjct 29708 GATACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 29767
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| || || |||||||| |||||||| || |||| ||||| | | ||||| ||
Sbjct 29768 GCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 29827
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || ||||||||||| || || | |||| |||||
Sbjct 29828 CATTCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACTTCATGGTGG 29875
>seq397823
Length=5921
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| |||| || || || ||||| || ||||| ||||| || |
Sbjct 1893 ATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 1834
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| | | |||| | || || || || || || ||||| | ||||||| | |||||
Sbjct 1833 GATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCAG 1774
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||||||||| |||||||| || |||| ||||| | | ||||| ||
Sbjct 1773 CAAGGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 1714
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| |||||||||||||| | ||| | ||||| | |||
Sbjct 1713 AGTCAAAAGGAGTCCACTCTTCATCTTCTGTTGAGACTTCGTGCTGG 1667
>seq414080
Length=5684
Score = 116 bits (128), Expect = 4e-21
Identities = 165/228 (72%), Gaps = 7/228 (3%)
Strand=Plus/Plus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466
|||| || || | ||||| ||| || | ||| || |||||||| ||||| | |
Sbjct 4525 TGCAGATTTTCATGAAGAC-CTTCTGGGGATGACCATCACTCTTGAAGTTGAACCCTCAG 4583
Query 27467 ATAGCATTGCAAATT-TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||| | | ||| | | |||| || || ||||| ||||| ||||||||||| ||||||
Sbjct 4584 ATACAACAGAAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 4643
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| |||||||| || |||| |||| | ||||| ||
Sbjct 4644 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTT----GACTACAAC 4699
Query 27586 GTCCAAAAGGAATCCACTCTTCATCT-AGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||||||||| | | ||| | ||||| |||||
Sbjct 4700 ATTCAAAAGGAGTCCACTCTTCATCTAAATGTTGAGACTTCGTGGTGG 4747
>seq129591
Length=11435
Score = 116 bits (128), Expect = 4e-21
Identities = 147/198 (74%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG-TCAGG 27464
||||| |||||||| ||||| || | |||||||| || ||||||||||| || ||| |
Sbjct 4670 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTCAAGCTCA-G 4728
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | || || ||||| | |||| |||| || | ||| ||||
Sbjct 4729 TGTCACCATTGAGAATGTCAAAGCCAAAATCAAAGACACTGAGGACATCCTGCCACACCA 4788
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| |||| |||||||| | || || || |||| || ||||| || ||||||||||
Sbjct 4789 ACACAGTCTGATTTTTGCAGACAAACAGCT-GAGGGTGGCCGTACTCTCTCAGACTATAA 4847
Query 27585 TGTCCAAAAGGAATCCAC 27602
| |||| || ||||||||
Sbjct 4848 TATCCAGAAAGAATCCAC 4865
>seq168090
Length=9538
Score = 105 bits (116), Expect = 8e-18
Identities = 119/158 (75%), Gaps = 1/158 (1%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || |||||| | ||| ||||||| || || || ||||| ||| | |
Sbjct 8710 AATGCAAATCTTCGTGAAGACGTTGACCAGCAAGACCATCACCCTGGAGGTAGAGCCCAG 8651
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| ||| ||||||| || || ||||| |||| || | |||||| || ||
Sbjct 8650 TGACATCATCAGGAATGTGAAGGCCAAGATCCAGGATGAGGAAGGCA-TCCTCCCGAACA 8592
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
|||| | || || ||||| || ||||| || || ||||
Sbjct 8591 GCAGAGGCTCATCTTTGCAGGCAAGCATCTGGAAGATG 8554
>seq366847
Length=8421
Score = 102 bits (112), Expect = 9e-17
Identities = 145/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||| ||| ||||| || || |||||||| | || |||||||| ||| | ||
Sbjct 1626 ATGCAGATCTGTGTGAAGACCCTGACAGGCAAGACCACCACCCTTGAGGTGGAGACCAGT 1685
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| ||| ||| | ||||| ||||| || ||||||||||| || | || ||||||
Sbjct 1686 GACTCCATAAAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGTATCCTGCCTGACCAG 1745
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||| ||| |||||| || || || || |||| | | || || ||||| | ||
Sbjct 1746 CAGCATCTGATTTTTATGGGCAAACAGTGGGAAGATGGTAGAACTCT--CAGACAACAAC 1803
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| || || ||||| || ||
Sbjct 1804 ATCCAGAAAGAGTCCACCCTACA 1826
>seq80074
Length=6561
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184
|||||| |||| | |||||||||||||| ||| ||||| |||||| | | ||||
Sbjct 2995 ACCATTATCAATTTGGCTCAGAACTTTGTGGGTAGCAATAATCTGAACCTCTTGCAGCCC 3054
Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244
||| |||||||| ||| |||| |||||||||||| |||| || | || ||||||
Sbjct 3055 ATTGGTCAGTTTGGTACCAGGCTGCATGGTGGCAAGGATTCTGCTAGTCCTCGATACATC 3114
Query 32245 TTCAC 32249
|||||
Sbjct 3115 TTCAC 3119
>seq260509
Length=18370
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || |||||||| || ||||| ||||| ||| | ||
Sbjct 4509 ATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACTCTAGAGGTCGAGCCCAGT 4450
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||||| ||| | || |||||||| || |||||||||||
Sbjct 4449 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGG 4406
>seq418289
Length=29330
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 64717 CGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATT 64776
||| ||| ||| |||||| ||||||||||| ||||||||||| || || || ||
Sbjct 26663 CGTGTCGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATA 26722
Query 64777 TTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832
|||||||| ||||| || || |||||||| || || | ||||| || || || ||
Sbjct 26723 TTCTGGCTCAAAAAACGAGGTCTGATGCCCGGCCTCACATTTTCCAATGAACTTAT 26778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567305976297280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |