Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq366492 127 3e-24
seq375440 93.3 6e-14
>seq366492
Length=15653
Score = 127 bits (140), Expect = 3e-24
Identities = 195/274 (71%), Gaps = 8/274 (3%)
Strand=Plus/Plus
Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336
||||| |||||||| |||||| | || |||||||| | ||||| || || | |||
Sbjct 5872 GACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAGGATCCCCGA-AGTCCC 5930
Query 14337 GGGGGGATCCCCGTTC--ACGTCA--AGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392
||| || | || | | | || ||||||||| || |||||| || | | |||
Sbjct 5931 AGGG---TCACTGTCCTTAAGCCATAAGTACGACATGTCCGACATGCACGCGATTGCCAG 5987
Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452
||| ||||||||||| |||| || || || || || || |||| |||||||| ||
Sbjct 5988 GTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCCCCCTACCCGCCGTG 6047
Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512
| |||| ||||||| | | || | ||| | ||||| | || ||| |||| ||| ||
Sbjct 6048 CAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCGGGTGACTTGAACTGGATGTT 6107
Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
| |||| | ||| ||||||||||||||||||||
Sbjct 6108 GCGCGTGCACCACTTGTTCGCCAACAAGTTCGAC 6141
>seq375440
Length=19304
Score = 93.3 bits (102), Expect = 6e-14
Identities = 179/264 (68%), Gaps = 0/264 (0%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| |||||| |||||| | || || |||||||||||||| | ||| |||| | |||
Sbjct 14145 CCACTGAGCAGAGAAGAGTTAGACTTCCCCATCGCCTACTCTGTGGTGGTCCATGAGAAG 14204
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
|| || | ||||| || || ||| | || | || ||||| |||||| | |||||||||
Sbjct 14205 ATTGAAAACTTCGAACGGCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGCGTC 14264
Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850
|| ||||| |||||| || |||| || ||| ||||||| |||
Sbjct 14265 CATGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCAGTCAAGGCCATCATTTCCTGC 14324
Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910
||||| || || | ||||| | || | ||||| |||| ||||||| |
Sbjct 14325 TTCCCAAATGTCTTCATGGCCAGTAAGTTGGTCCGGGTGGTTTACGCCTCCTGGTCCAGG 14384
Query 13911 GTGCAGGCCGACCTCAGCTGCATG 13934
|||||||| ||||| | ||| |||
Sbjct 14385 GTGCAGGCTGACCTGAACTGTATG 14408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655268928957440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |