Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq397970 434 9e-117
seq273439 219 4e-52
seq397969 159 3e-34
>seq397970
Length=5258
Score = 434 bits (480), Expect = 9e-117
Identities = 586/814 (72%), Gaps = 7/814 (1%)
Strand=Plus/Plus
Query 34139 GGCTACCGGAAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCC 34198
|||| ||||||| ||||| || || || || ||||| || |||||||||| |||||
Sbjct 1585 GGCTTTCGGAAGGATGACCGCACGGGCACCGGCACCCTGTCGGTGTTCGGCATGCAGGCG 1644
Query 34199 CGATACAACCTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGC 34258
|| |||| ||| | | |||||||| |||||||| || |||||||| | ||| |||||
Sbjct 1645 CGCTACAGCCTGAGAGATGAATTTCCTCTGCTGACAACCAAACGTGTTTTCTGCAAGGGT 1704
Query 34259 GTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCC 34318
|| |||||| |||||||||| | | ||| |||| ||| | |||||||| || |||
Sbjct 1705 GTTTCGGAGGAGTTGCTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAGCTGTCTTCC 1764
Query 34319 CGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC 34378
||| ||||| |||||||| || | ||||| |||||||| |||||| | ||| |||
Sbjct 1765 AAGGGAGTGAAAATCTGGGATGCCAATGGGTCCCGAGACTTCTTGGACAGCCTGGGATTC 1824
Query 34379 -CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGG 34437
||| | | || |||| || || ||||| || || || || |||||||| || |||||
Sbjct 1825 TCCACCAGAGCAGAAGGG-GATTTAGGCCCAGTTTATGGCTTTCAGTGGAGGCATTTTGG 1883
Query 34438 GGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTA 34497
||| || || | | || | || ||||| | || |||| || || ||||| |
Sbjct 1884 GGCCGAATACAAAGATATGGATTCAGATTATTCAGATCAAGGAGTAGATCAACTGCAAAA 1943
Query 34498 CGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAA 34557
|||| ||||| | || |||||||| |||||||| ||| | |||| || |||||
Sbjct 1944 AGTGACTGACACAATCAAAACCAACCCTGACGACAGAAGAATCATCCTGTGTGCTTGGAA 2003
Query 34558 CCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617
|| || ||||||||||| ||||| || |||||||||||| |||| ||||| ||||||||
Sbjct 2004 TCCAAAAGATCTCCCTCTCATGGCCCTACCCCCGTGCCACGCCCTTTGCCAGTTCTACGT 2063
Query 34618 CGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGT 34677
| ||| || ||||||||||||||||| || || | || ||||| ||||| | || ||
Sbjct 2064 GGTGAACGGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGATATGGGCCTGGGTGT 2123
Query 34678 GCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTT 34737
||| |||||||| || || ||||| |||| ||||||||||| || || ||| |
Sbjct 2124 GCCCTTCAACATCGCCAGCTACGCCCTGC-----TACATGATCGCACACATCACGGGCCT 2178
Query 34738 GGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797
| || || || | || || || ||||| ||||| || || |||||||| ||||| ||
Sbjct 2179 GAAGCCAGGTGACTTTGTACACACTTTGGGAGATGCACACATTTACCTGAATCACATTGA 2238
Query 34798 GCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCG 34857
|| ||| || ||||| || ||||| || | || |||||| |||||| ||| ||||
Sbjct 2239 GCTGCTGAAAATTCAGCTTCAGCGAGAACCAAGGCCTTTCCCCAAGCTCAGAATCCTTCG 2298
Query 34858 AGCCGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTACCGGCC 34917
| || ||| |||||||| | | || ||||| | | ||||| ||| ||
Sbjct 2299 AAAAGTTGAGAAAATTGATGACTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCC 2358
Query 34918 GCACTCGGCCCTGAAGATGGAGTTGGCGGTGTAG 34951
||| || | | || ||||| |||| || |||
Sbjct 2359 TCACCCGACTATTAAAATGGAAATGGCTGTTTAG 2392
Score = 434 bits (480), Expect = 9e-117
Identities = 586/814 (72%), Gaps = 7/814 (1%)
Strand=Plus/Minus
Query 6394 CTACACCGCCAACTCCATCTTCAGGGCCGAGTGCGGCCGGTACCCTTCCAACACGAAGTC 6453
||| || |||| ||||| || | | || ||| || ||| ||||| | | |||||
Sbjct 2392 CTAAACAGCCATTTCCATTTTAATAGTCGGGTGAGGATTGTAGCCTTCAATCTGAAAGTC 2333
Query 6454 CTCGCTCCTAAAGTCATCGATTGAGGTGACGGCTCGAATAATTTTGAGCTGGGGGAACGG 6513
|| | | |||||||| ||| || ||||| ||| |||||| |||||| ||
Sbjct 2332 TTCAGCCTTGAAGTCATCAATTTTCTCAACTTTTCGAAGGATTCTGAGCTTGGGGAAAGG 2273
Query 6514 TCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGC 6573
| || ||||| || ||||| || ||| |||| ||||| |||||||| || || ||
Sbjct 2272 CCTTGGTTCTCGCTGAAGCTGAATTTTCAGCAGCTCAATGTGATTCAGGTAAATGTGTGC 2213
Query 6574 ATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTA 6633
||| ||||| || || || | || || || || ||| || || |||||||||||
Sbjct 2212 ATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGTGCGATCATGTA 2153
Query 6634 CGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCG 6693
|||| ||||| || || |||||||| ||||| || | ||||| ||||| || |
Sbjct 2152 -----GCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCCATATCTCCTGACCT 2098
Query 6694 TTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCA 6753
|| || ||||||||||||||||| || ||| | |||||||| ||||| |||| ||||||
Sbjct 2097 CTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCGTGGCA 2038
Query 6754 CGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCT 6813
|||||| || ||||| ||||||||||| || || ||||| || |||| | ||| |||||
Sbjct 2037 CGGGGGTAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGATGATTCTTCT 1978
Query 6814 GTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCC 6873
||| |||||||| || | ||||| |||| | ||||| || || |||| || |
Sbjct 1977 GTCGTCAGGGTTGGTTTTGATTGTGTCAGTCACTTTTTGCAGTTGATCTACTCCTTGATC 1918
Query 6874 CGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTA 6933
||||| || | || | | || || |||||||| || |||||||| || || ||
Sbjct 1917 TGAATAATCTGAATCCATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATA 1858
Query 6934 GACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTC 6992
|| ||||| || || |||| || | | ||| ||| ||| | |||||| |||||||
Sbjct 1857 AACTGGGCCTAAATC-CCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTC 1799
Query 6993 GAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
| ||||| | || |||||||| ||||| ||| ||| || |||||||| | ||| ||||
Sbjct 1798 GGGACCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGG 1739
Query 7053 CCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCG 7112
||| | | |||||||||| |||||| || ||||| ||| | |||||||| || |
Sbjct 1738 ATCCCTTGATAAACCACAGCAACTCCTCCGAAACACCCTTGCAGAAAACACGTTTGGTTG 1679
Query 7113 TCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCGAACACGGAGAGGG 7172
||||||| |||||||| | | ||| |||| || ||||| |||||||||| || ||||
Sbjct 1678 TCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCGCGCCTGCATGCCGAACACCGACAGGG 1619
Query 7173 TCCCCGTCCCGGTCCGGTCCCCCTTCCGGTAGCC 7206
| || || || || ||||| ||||||| ||||
Sbjct 1618 TGCCGGTGCCCGTGCGGTCATCCTTCCGAAAGCC 1585
>seq273439
Length=4507
Score = 219 bits (242), Expect = 4e-52
Identities = 511/762 (67%), Gaps = 28/762 (4%)
Strand=Plus/Plus
Query 34095 GGGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCGGAAGGGGG 34154
||||| |||||| | | |||| | || |||||| | |||| | |||||| |
Sbjct 1728 GGGAGCTGCAGTACCGGGGTCAGATTTAGCACATCCTCCGCTGCGGCTTC-GGAAGGATG 1786
Query 34155 ACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGGG 34214
||| || | || || |||| | || || | ||||||| | ||| ||| | |
Sbjct 1787 ACCACGCCCGCACCGGCTCCCTGACGATGCTCCTCTCACAGGCGCACGACAGCCTGAGAG 1846
Query 34215 GCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGC 34274
||||||| |||||||| |||| |||| | ||||||||| | || ||||||
Sbjct 1847 ATGAATTTCGTCTGCTGACA--GAAAAGTGTTTTCTGGAAGGGTTTTTGGGACGAGCTG- 1903
Query 34275 TGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCT 34334
||||| | | ||| |||| || | |||||||| || ||| ||| ||||| ||||
Sbjct 1904 --TGGTTGATCAAGGGCTCCACAAATGCTAAGGAGCTGTCTTCCAAGGGAGTGAAAATCT 1961
Query 34335 GGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGG 34394
|||| || |||||||| |||||||| |||||| | || || | | | || || |
Sbjct 1962 GGGATGCCCACGGGTCCCGAGACTTCTTGGACAGCCTGGTACTCTCCACCAGAGAAGAAG 2021
Query 34395 GCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGG-GGCGGAGTATCGGG-- 34451
| || || ||||| || | | || |||||||| |||||| ||| || || |
Sbjct 2022 GGGATTTAGGCCCAGTTCATAGCTTTCAGTGGAGGT-CTTTGGTGGCTGAATACAAAGAT 2080
Query 34452 --GGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACAC 34509
||| || | ||||| | || |||| ||||| ||||| | ||||| |||||
Sbjct 2081 GTGGATTTAAATG---TATTCACGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGACAC 2137
Query 34510 CTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCT 34569
| || || ||||| |||||||| ||| | | || || ||||| | ||| ||||
Sbjct 2138 AATCAAAACCAAACCTGAAGACAGAAGAATCATTCTATGTGCTTGGAATCAAAAG-ATCT 2196
Query 34570 CCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGA 34629
||||| || || |||| | ||| ||||| |||||||| | ||| ||
Sbjct 2197 TCCTCTCATA---------CCCTGCCGC--CCTTTGCCACTTCTACGTGGTGAACCATGA 2245
Query 34630 GCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACAT 34689
|||||||||| |||| || || | || ||||||| ||| | || ||| | |||||| |
Sbjct 2246 GCTGTCCTGC-AGCTGTACCAGAGGTCAGGAGACAGGGGCCTGGGTGTGTCCTTCAACGT 2304
Query 34690 TGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGA 34749
|| || || || |||||||| ||||||||||| || || || || || || ||
Sbjct 2305 CGCCAGCTATGCCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAAGCCAGGTGA 2364
Query 34750 GCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGAT 34809
|| || || ||||| ||||| || || |||||| | ||||| |||| ||| ||
Sbjct 2365 CTCTGTACACACTTTGGGAGATGCACACATTTACCTGGATCACATTGAGCTGCTGAAAAT 2424
Query 34810 CCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAAT 34851
||||| || |||| || | || ||||| ||||||||||
Sbjct 2425 GCAGCTTCAGGGAGAACCAAGGCCTTTCCCAAAGCTCAAAAT 2466
Score = 219 bits (242), Expect = 4e-52
Identities = 511/762 (67%), Gaps = 28/762 (4%)
Strand=Plus/Minus
Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553
|||||||||| ||||| || | || |||| || ||||| || ||| |||| |||
Sbjct 2466 ATTTTGAGCTTTGGGAAAGGCCTTGGTTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATG 2407
Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613
|| | |||||| || || ||||| ||||| || || || || || || || ||
Sbjct 2406 TGATCCAGGTAAATGTGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCT 2347
Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673
|| || ||||||||||| |||||||| || || || || | |||||| | ||| ||
Sbjct 2346 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGACGTTGAAGGACACACCC 2287
Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733
| ||| ||||||| || | || || |||| |||||||||||| ||| | ||||||
Sbjct 2286 AGGCCCCTGTCTCCTGACCTCTGGTACAGCT-GCAGGACAGCTCATGGTTCACCACGTAG 2228
Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793
|| ||||| ||| | |||| || || ||||| |||| ||| | |||||
Sbjct 2227 AAGTGGCAAAGG--GCGGCAGGG---------TATGAGAGGAAGAT-CTTTTGATTCCAA 2180
Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853
|| || | | ||| |||||||| ||||| || || | ||||| ||||| | |||
Sbjct 2179 GCACATAGAATGATTCTTCTGTCTTCAGGTTTGGTTTTGATTGTGTCAATCACCTTTTGC 2120
Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCC----CCCGATACTCCGCC-C 6908
|| ||||| |||| || | ||||| | || ||| | || || ||| |
Sbjct 2119 AGTTGGTCTACTCCTTGACGTGAATA---CATTTAAATCCACATCTTTGTATTCAGCCAC 2063
Query 6909 CAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA 6968
||||| |||||||| || | | || ||||| || || || || || | | | ||
Sbjct 2062 CAAAG-ACCTCCACTGAAAGCTATGAACTGGGCCTAAATCCCCTTCTTCTCTGGTGGAGA 2004
Query 6969 ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGG 7028
|| | |||||| |||||||| |||||||| || |||||||| ||||| ||| ||
Sbjct 2003 GTACCAGGCTGTCCAAGAAGTCTCGGGACCCGTGGGCATCCCAGATTTTCACTCCCTTGG 1944
Query 7029 ACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGC 7088
| || |||||||| | || |||| ||| | | ||||| |||||| || | |
Sbjct 1943 AAGACAGCTCCTTAGCATTTGTGGAGCCCTTGATCAACCA---CAGCTCGTCCCAAAAAC 1887
Query 7089 CCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGG 7148
|||||||| | |||| |||| |||||||| ||||||| | | ||| ||| | |
Sbjct 1886 CCTTCCAGAAAACACTTTTC--TGTCAGCAGACGAAATTCATCTCTCAGGCTGTCGTGCG 1829
Query 7149 CCTGTGTGCCGAACACGGAGAGGGTCCCCGTCCCGGTCCGGTCCCCCTTCCGGTAGCCCT 7208
|||||| | || || | |||| || || | || |||| |||||| | ||||
Sbjct 1828 CCTGTGAGAGGAGCATCGTCAGGGAGCCGGTGCGGGCGTGGTCATCCTTCC-GAAGCCGC 1770
Query 7209 CCCTGAGGATCCGCGCCACCTGATACAGATACTGCCACTCCC 7250
| |||||| || | |||| | | |||||| |||||
Sbjct 1769 AGCGGAGGATGTGCTAAATCTGACCCCGGTACTGCAGCTCCC 1728
>seq397969
Length=7843
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|||||||| || ||||| || |||||||||||| |||| ||||| |||||||| | |||
Sbjct 7540 GATCTCCCCCTCATGGCCCTACCCCCGTGCCACGCCCTTTGCCAGTTCTACGTGGTGAAC 7599
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| | || | || ||||||||||| | || ||||| |||
Sbjct 7600 GGTGAGCTGTCCTGCCAGCTGTTCCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTC 7659
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||||| |||||||| ||||||||||| ||
Sbjct 7660 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 7700
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| ||||| || || |||||||| ||||| || | |||
Sbjct 7700 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 7641
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||||| || | || | ||||||||||||||||| || ||| | |||||||| |||
Sbjct 7640 ATGTCTCCTGACCTCTGGAACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 7581
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||||||||| || ||||| || ||||||||
Sbjct 7580 CAAAGGGCGTGGCACGGGGGTAGGGCCATGAGGGGGAGATC 7540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445900931263680
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