Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq364176 96.9 2e-15
seq258579 96.9 2e-15
seq336898 93.3 3e-14
seq393589 89.7 3e-13
seq418776 84.2 1e-11
seq414080 82.4 5e-11
>seq364176
Length=18321
Score = 96.9 bits (106), Expect = 2e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||| ||||| || || ||||||||||| || || ||
Sbjct 5568 AATATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCC 5509
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||| || |||| |||| || || || || ||||| | || || ||
Sbjct 5508 TTGGATACAACAGAAAATGTAAACGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAC 5449
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||
Sbjct 5448 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCAC 5389
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|||| ||||| |||||||| | ||| | || || ||
Sbjct 5388 AACACTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 5351
>seq258579
Length=20613
Score = 96.9 bits (106), Expect = 2e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||| ||||| || || |||||||| || || || ||
Sbjct 18966 AATATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTTGAGGTCGAACCC 19025
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| | | |||| |||| || || ||||| ||||| | || || ||
Sbjct 19026 TCGGATGCAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 19085
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| | ||| || |||
Sbjct 19086 CAGCAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGACGTATTTTGTCTGACTAC 19145
Query 23788 AACATACAAAAAGAGTCC 23805
||| | ||||| ||||||
Sbjct 19146 AACGTTCAAAAGGAGTCC 19163
>seq336898
Length=33758
Score = 93.3 bits (102), Expect = 3e-14
Identities = 142/201 (71%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||| | || ||||| || || | | ||||||||||| ||||| ||
Sbjct 29645 AATATGCAGATTTTCTTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCC 29704
Query 23668 ACGGACACTGTTGAAATAT-TAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||| || | |||| || |||| || | ||||| ||||| | || || ||
Sbjct 29705 TCGGATACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGA 29764
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| || | || ||||| ||||| ||||||||||| | ||| ||||| || ||
Sbjct 29765 CCAGCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 29824
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| ||||| ||||| ||
Sbjct 29825 CAACATTCAAAAGGAGTCTAC 29845
>seq393589
Length=19132
Score = 89.7 bits (98), Expect = 3e-13
Identities = 137/194 (71%), Gaps = 1/194 (1%)
Strand=Plus/Plus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||||||| | || ||||| || |||| | | ||||||||| | ||||| || ||
Sbjct 7846 TGCAGATTTTCATGAAGACCCTGACAGGAAGACC-ATCACTCTCAAGGTTGAACCCTTGG 7904
Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731
| || | |||| |||| || || ||||| ||||| | | || || || |
Sbjct 7905 ATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 7964
Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791
| | | || ||||| ||||| ||||||||||| | ||| ||||| || |||||||
Sbjct 7965 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 8024
Query 23792 TACAAAAAGAGTCC 23805
| ||||| ||||||
Sbjct 8025 TTCAAAAGGAGTCC 8038
>seq418776
Length=96061
Score = 84.2 bits (92), Expect = 1e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| | | || || ||||| || || || || ||||
Sbjct 54879 ATGCAGATCTTCGTGAAGACCCTGANNNGCAAGACCATCACCCTGGAGGTGGAGTCCAGT 54938
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | || || ||||| | || || || |
Sbjct 54939 GACACCATCGAGAATGTGAAGGCCAAGA-TCCAGGATAAGGAAGGCATCCCCCCTGACTA 54997
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| |||||||| |||||||| | ||||| | ||||||||
Sbjct 54998 GCAGAGGCTTATCTTTGCAGGCAAACAGCTGGAAGATGGCTGCACTCTTTCTGATTACAA 55057
Query 23790 CATACAAAAAGAGTCCACATTACA 23813
||| || |||||||| ||||| ||
Sbjct 55058 CATCCAGAAAGAGTCAACATTGCA 55081
>seq414080
Length=5684
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/197 (70%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||||||| | || ||| || |||| | | |||||||| |||||||| || | |
Sbjct 4525 TGCAGATTTTCATGAAGACCTTCTGGGGATGACC-ATCACTCTTGAAGTTGAACCCTCAG 4583
Query 23672 ACACTGTTGAAATAT-TAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
| || |||| || |||| || || || || ||||| | || || || ||
Sbjct 4584 ATACAACAGAAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 4643
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| | | || ||||| ||||| ||||||||||| | | | ||||| || ||||||
Sbjct 4644 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTT----GACTACAAC 4699
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||||||
Sbjct 4700 ATTCAAAAGGAGTCCAC 4716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 336273464813552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |