Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 150 4e-31
seq393589 140 8e-28
seq336898 131 4e-25
seq377817 129 1e-24
seq418776 120 7e-22
seq411564 118 3e-21
seq397823 118 3e-21
seq350746 105 2e-17
seq378590 91.5 3e-13
seq309868 87.8 4e-12
seq411253 86.0 1e-11
seq366847 84.2 5e-11
>seq258579
Length=20613
Score = 150 bits (166), Expect = 4e-31
Identities = 167/223 (75%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553
||||||||| ||||| || |||| ||| || ||||| || ||||| || | |||| | |
Sbjct 19188 GAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATAC 19129
Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613
|||||||| || ||||| || || ||||| |||| ||| ||||| || ||||| ||||
Sbjct 19128 GTCCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 19069
Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673
||||||| |||||||| ||| ||| ||| || | || |||| ||| || || | |
Sbjct 19068 CCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAG 19009
Query 225674 TGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||| ||||| ||||||| || || | ||| | ||||| ||
Sbjct 19008 TGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 18966
>seq393589
Length=19132
Score = 140 bits (154), Expect = 8e-28
Identities = 163/219 (74%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553
||||||||| ||||| || |||| ||| || ||||| | ||||| || | |||||| |
Sbjct 8063 GAAGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 8004
Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613
|||||||| || ||||| ||||| ||||| |||| ||| ||||| || | ||| ||||
Sbjct 8003 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTT 7944
Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673
||||||| |||||||| ||| ||| ||| || || || ||| ||| || | | |
Sbjct 7943 CCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAG 7884
Query 225674 TGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712
|||| ||||| || |||| || || ||||| | ||||
Sbjct 7883 TGATGGTCTT-CCTGTCAGGGTCTTCATGAAAATCTGCA 7846
>seq336898
Length=33758
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553
||||||||| ||||| || ||||| || || ||||| | ||||| || | |||||| |
Sbjct 29868 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 29809
Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613
|||||||| || ||||| ||||| ||||| ||| ||| ||||| || ||||| ||||
Sbjct 29808 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAGGAATTCCTT 29749
Query 225614 CCTTGTCTTGGATCTTTTGCTTCACA-GCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||| ||| |||| ||| ||| ||| || || || |||| ||| || || |
Sbjct 29748 CCTTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCCGAGGGTTCAACCTCGAGA 29689
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| | | | || |||| || || | ||| | ||||| ||
Sbjct 29688 GTGATGGCCATCCCTGTCAGGGTCTTCAAGAAAATCTGCATATT 29645
>seq377817
Length=34012
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| |||||||||| | | ||||| || || ||||| || ||||||||| | |||||
Sbjct 14774 CCAAATTTACAACGTGGTAGTAACGGCCCACGCATTTGTAATAATTTTCTTTATAGTTAT 14715
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || ||||| || ||||| || | || || ||||| ||||| || || |
Sbjct 14714 ACCCATTATAATTGGCGGGTTTGGAAACTGGCTAGTACCCTTAATAATTGGGGCGCCCAA 14655
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTC 7729
|||||||||||| | | |||||||| ||||| |||||||| |||||||| ||||
Sbjct 14654 TATGGCTTTTCCCCGTATAAACAATATGAGTTTCTGATTACT----CCTTCCTTCTTTC 14600
>seq418776
Length=96061
Score = 120 bits (132), Expect = 7e-22
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| | || || ||||| |||| |||||||| | | ||| | ||||||
Sbjct 55090 AGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCT 55031
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || |||||||| | || | ||| || || || |||||||| ||
Sbjct 55030 TCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGGATGCCTTCCTTATCC 54971
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || ||||| || | ||||| |||
Sbjct 54970 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTC 54911
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||| ||| || || | ||| | |||||
Sbjct 54910 TTGCNNNTCAGGGTCTTCACGAAGATCTGCAT 54879
>seq411564
Length=61085
Score = 118 bits (130), Expect = 3e-21
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || ||||| |||| |||||||| | | ||| | || |||
Sbjct 40458 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCT 40517
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGA--ATACCTTCCTTGT 225619
|| ||||| || || || ||||| || | || |||||||| || || |||||||| |
Sbjct 40518 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTAT 40577
Query 225620 CTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679
| |||||||| ||||||| | ||||||||| || ||||| || | ||||| |
Sbjct 40578 CCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 40637
Query 225680 TCTTGCCCGTCA 225691
||||||||||||
Sbjct 40638 TCTTGCCCGTCA 40649
>seq397823
Length=5921
Score = 118 bits (130), Expect = 3e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| | ||| || |||||||| || ||||| ||||| || | ||||||
Sbjct 1672 ACGAAGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGACTGTTGTAGTCAGACAAAGT 1731
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| || || | || ||| |||| | ||||| |
Sbjct 1732 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAATCCTTGCTGGTTAGAAGGAATTAC 1791
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| ||||||||||| || ||| ||| | || || |||| ||| || || |
Sbjct 1792 TTCCTTATCTTGGATCTTGGCGTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAG 1851
Query 225672 CGTGATCGTCTTGCCCGTCA 225691
||||| ||||| || ||||
Sbjct 1852 AGTGATGGTCTTCCCTGTCA 1871
>seq350746
Length=65213
Score = 105 bits (116), Expect = 2e-17
Identities = 130/175 (74%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACG-GCGCATGCCTTTGTTATGATTTTCTTTTTTGTTA 7609
|||| | |||||| ||| || || | || || || ||||| || || || ||| | || |
Sbjct 28094 CCAAATCTACAAC-TTACTAGTAAGAGCCCACGCGTTTGTAATAATCTTTTTTATAGTCA 28152
Query 7610 TGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTG 7669
| || |||| || ||||| || ||||| ||| | || || |||| ||||| || ||||
Sbjct 28153 TACCCATTATAATTGGCGGATTTGGAAACTGACTAGTGCCCCTAATAATTGGAGCACCTG 28212
Query 7670 ATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
|||| || ||||| | | ||||| ||||||||||| |||| || ||||||||
Sbjct 28213 ATATAGCCTTTCCCCGTATAAACAACATAAGTTTTTGGCTACTCCCTCCTTCCTT 28267
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/103 (79%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||| ||||| ||||| ||||| |||||||||||||| ||||| || || ||||| |
Sbjct 28588 ATATTTCGGGATGTCCAAAGAATCAAAATAAATGTTGATATAGGATTGGGTCTCCTCCTC 28529
Query 370728 CTGATGGATCAAAAAAGCTAGTA-TTAAAATTTCTATCAGTTA 370769
||| || ||||| || | ||| || | ||||| ||| ||||
Sbjct 28528 CTGCAGGGTCAAAGAAAGTTGTATTTTAGATTTCGATCGGTTA 28486
>seq378590
Length=46420
Score = 91.5 bits (100), Expect = 3e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||||| ||| || || || | || ||| ||| ||||||| |||||| |||||||
Sbjct 28377 CACTTCAATGCCTGGCTCCTTATTCTGGATGTTCTATGGGAGAATGTTTTAGGGATAATG 28436
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAA 5114
| ||||| ||||| |||||||||||||| ||| ||||
Sbjct 28437 GCAAACACGCTTTGATCATCTACGATGAGTTATCTAAA 28474
>seq309868
Length=10903
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||| || || ||||| || || || ||||| || || || |||||||| ||||||||
Sbjct 1547 AATACCTGTCCGTCAGTGATGGAAATGACATTCGTTGGAATGTAAGCAGACACATCACCA 1606
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||||||||| | || ||||| || || | || ||||||||||||
Sbjct 1607 GCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 1654
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || || | || ||| ||| |||||||| ||||| |||||||
Sbjct 1983 CACTTCAGTACCTGGCTCCTTATTCTGGATGTTCTATGGGAGAATACTTTAGGGATAATG 1924
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| ||||||||||| ||||| || || || ||| ||||| ||||
Sbjct 1923 GCAAACATGCTTTGATCATTTATGACGACTTATCCAAACAGGTCAA 1878
>seq411253
Length=43008
Score = 86.0 bits (94), Expect = 1e-11
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | |||||||| | | || |||||||| ||||| || |||||||| || ||
Sbjct 30699 CCAAATCTACAACGTGGTACTGACAGCGCATGCGTTTGTAATATTTTTCTTTAGAGTCAT 30758
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
||| | || | | ||| |||||||||| | || ||| |||||| | || | ||
Sbjct 30759 GCCCATCATACTTCGTGGTGTCGGAAATTGGCTGGTGCCTCCAATGATCAGAGCATCAGA 30818
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727
||||||||| | | | || || || ||||||||| |||| || ||||| || ||
Sbjct 30819 TATGGCTTTCCTCTGTGTAAATAACATGAGTTTTTGACTACTCCCTCCTTCTTTCTT 30875
>seq366847
Length=8421
Score = 84.2 bits (92), Expect = 5e-11
Identities = 133/190 (70%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||| ||||| |||| |||| || | | |||||| ||||||
Sbjct 1835 AGCACCAAGTGTAGGGTGGACTCTTTCTGGATGTTGTTGTCTG--AGAGTTCTACCATCT 1778
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||| || || || || || | || ||||| ||| | ||||| |||||||||
Sbjct 1777 TCCCACTGTTTGCCCATAAAAATCAGATGCTGCTGGTCAGGCAGGATACCCTCCTTGTCT 1718
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| ||| | |||| ||| ||| ||||| || | ||| | |||
Sbjct 1717 TGGATTTTGGCCTTGACATTCTTTATGGAGTCACTGGTCTCCACCTCAAGGGTGGTGGTC 1658
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 1657 TTGCCTGTCA 1648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186091828162136
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