Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 340 2e-88
seq404197 266 3e-66
seq265909 123 2e-23
seq338581 120 3e-22
seq418289 116 3e-21
seq354280 100 2e-16
seq26090 100 2e-16
seq400361 98.7 8e-16
>seq366024
Length=42324
Score = 340 bits (376), Expect = 2e-88
Identities = 608/880 (69%), Gaps = 16/880 (2%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || ||| ||||| ||| || |||| ||||| || ||||| | |||||||| |||
Sbjct 18341 TGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCC 18282
Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTT-TCACACTTTAGAGCTACA--AGC 4376
||||| ||||| ||||| | | || || || | | || |||| | |
Sbjct 18281 ATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCC---AGCTCCCGCATA 18225
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
| || ||| || || ||||| || ||||| |||| | ||| || || ||||| |
Sbjct 18224 AGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAAAGTGCAATTCATCCCAATGAGC 18165
Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496
|||| || || || | || | ||||| |||||||| | || || | ||||||
Sbjct 18164 TTCACTGGCAGGGCATCCGTGAGGAACTCCTGTTCTATTCTAACTGCATTGACGATTATT 18105
Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556
| ||| | | | | | || ||||| | || | || | || | | || |||||
Sbjct 18104 TATTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAATATCAGGCAGGCAAAG 18045
Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616
||||| || ||||| |||||||||||||| ||||| || ||||| || | ||||| ||
Sbjct 18044 TCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGTATC 17985
Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676
| ||||| ||||| ||||| ||||| | ||||| || ||||||||||| || |||||
Sbjct 17984 AGACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCC 17925
Query 4677 ACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTT 4735
|| || ||||| ||||| || || || ||| ||| ||||||| |||||
Sbjct 17924 ACTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCT-CTTTGTCCCCGATCCAGCA 17866
Query 4736 TAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---A 4792
|| ||||| | || || ||||| || || || ||||| | |||||||| || | |
Sbjct 17865 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGAAA 17806
Query 4793 TTTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851
|| |||| || ||| |||| ||| |||||||| || || || |||||||||||||
Sbjct 17805 TTCCCTTTCTT----TGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAG 17750
Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911
|||| || ||||| || ||||| | || || || || || | ||||| || | ||||
Sbjct 17749 AATGGATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAA 17690
Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971
|||| | | ||| || || |||||||| |||||||| || ||||| |||||||| |
Sbjct 17689 CTTCTTGGCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGA 17630
Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031
| |||| || ||| || || || || || |||||||| || || |||||| | |
Sbjct 17629 AAGCCAGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAA 17570
Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091
|| || | | || || |||||| | |||||||| || || || ||||| || ||||
Sbjct 17569 TGTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACA 17510
Query 5092 TAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
| |||||||||| | || | || |||| ||||||||
Sbjct 17509 TCTGCCAAATATCATGGTATTTGATAGGAAAGATGACAAA 17470
>seq404197
Length=65104
Score = 266 bits (294), Expect = 3e-66
Identities = 576/854 (67%), Gaps = 16/854 (2%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || ||| ||||| ||| || ||||| ||||| || ||||| | ||| |||| |||
Sbjct 53064 TGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAACTATTCTCC 53005
Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTT-TCACACTTTAGAGCTACA--AGC 4376
||||| ||||| ||||| | | || || || | | || |||| || |
Sbjct 53004 ATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCC---AGCTCCAGCATA 52948
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
| || ||| || | |||| || ||||| |||| | |||| || || ||||| |
Sbjct 52947 AGTCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCGCAATTCATCCCAATGAGC 52888
Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496
|||| | | || | || | ||||| |||||||| | || || | ||| ||
Sbjct 52887 TTCACTGTCGGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACTGCATTGACGATAATT 52828
Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556
||||| | | | | | || ||||| | || | || | |||| | | |||||
Sbjct 52827 TCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCAGGAAGGCAAAG 52768
Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616
||||| || ||||| |||||||||||||| ||||| || ||||| || | ||||||||
Sbjct 52767 TCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATC 52708
Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676
| |||| || || ||||| ||||| | ||||| || ||||||||||| || |||||
Sbjct 52707 AGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCC 52648
Query 4677 ACGGCGGCAAACGCTACTAATCGGGACCCG-AACGAGCTGGCTTTGTCTTTAATCCATTT 4735
|| |||||||| ||||| | || | | | | ||| ||||||| | |||||
Sbjct 52647 ACTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGC-CTCTTTGTCCTCGATCCAGCG 52589
Query 4736 TAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAA 4792
|| ||||| | || || ||||| || || || ||||| | || ||||| || ||
Sbjct 52588 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATGGCGTTGAAGAGAAA 52529
Query 4793 TTTACTTTTTTCAAATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851
|| |||| || ||| |||||||| |||||||| || || || ||||||||||| |
Sbjct 52528 TTCCCTTTCTT----TGGAATCTTGAATGTAAGTGTCAATGAGGAGACTATACATTTCCG 52473
Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911
||||||| ||||| || || || || || || || || | ||||| || | ||||
Sbjct 52472 AATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAATAATGGGCTTCCGTAATCTGAA 52413
Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971
|||| | | || | || || | |||||| ||||||| |||||||| |||||| | |
Sbjct 52412 CTTCTTGGCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCGTCACTTGCTGCAGAGA 52353
Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031
| | || ||||| || | || || || |||||||| || || || ||| | |
Sbjct 52352 AAGGCAGGACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCGGTGCTGAA 52293
Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091
|| || | | || || || ||| | ||||| || || || || || || || |||
Sbjct 52292 TGTCCTTGGAAAGGTCCACCTCCTCAGCCGTCCAGAAGGAAGCCTCAGCGTTCTTACACA 52233
Query 5092 TAGACCAAATATCA 5105
| ||||||||||
Sbjct 52232 TCTGCCAAATATCA 52219
>seq265909
Length=7629
Score = 123 bits (136), Expect = 2e-23
Identities = 161/220 (73%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824
||| || || ||||| || ||||| || || | ||||| |||||||| || || ||||
Sbjct 2063 AGCCCTTGTGAAAACAGACATTCAGATAGCTCTTCCTTCTGGGTGCTATGGGAGAGTAGC 2122
Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884
||| | ||||| ||||| | |||||||| || || || || || ||||| ||||||
Sbjct 2123 TCCACGTTCTGGCTTGGCTGCAAAACACTTCATAGATGTAGGAGCTGGTGTCATAGATGA 2182
Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAG 31941
||| |||||||||| ||||| |||| ||||||||||||| |||||| | | ||
Sbjct 2183 AGATTATAGAGGAAGTGTTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTGAAG 2241
Query 31942 TATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981
| ||||||| ||| | | || || || ||||| |||
Sbjct 2242 --TCAAAAAGGATGATCGAATTGCACAGCTCATTTGTGAA 2279
>seq338581
Length=33270
Score = 120 bits (132), Expect = 3e-22
Identities = 158/216 (73%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCT 31834
|||||||| || || || || | ||||| |||||||| || || ||||| | | |||
Sbjct 30241 AAAACCGACATCCAGATAGCTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTGCGCGTTCT 30182
Query 31835 GGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGA 31894
|| ||||| | |||||||| || || || || || ||||| |||||| ||| || |||
Sbjct 30181 GGTTTGGCTGCAAAACACTTCATAGATGTAGGAGCTGGTGTCATAGATGAAGATTACAGA 30122
Query 31895 GGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAG 31951
||||||||||| ||||| ||||||||| ||| |||||| | | || | ||||||
Sbjct 30121 GGAAACGTTGGTATTGTACTGTTTAATTCTGGCAAAGAAAAGT-TTGAAG--TCAAAAAG 30065
Query 31952 GGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATA 31987
| ||| | | || || || ||||| ||| | |||
Sbjct 30064 TGTGATCGAATTGCACATCTCATTTGTGAACAGATA 30029
>seq418289
Length=29330
Score = 116 bits (128), Expect = 3e-21
Identities = 99/122 (81%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|||||||||||||| ||||| || ||||| || | |||||||| | ||||| |||||
Sbjct 26790 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGACCTCGTTTTTTG 26731
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| || ||||| || |||||||| |||
Sbjct 26730 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGCT 26671
Query 4692 AC 4693
||
Sbjct 26670 AC 26669
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| ||| |||||||| || || || ||||||||||||||||| || ||||| || |||
Sbjct 24795 TCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGGATGTTTTCCATGGCA 24736
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
|| || || || || || || | ||||| || | ||||||||
Sbjct 24735 ATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTC 24692
>seq354280
Length=34579
Score = 100 bits (110), Expect = 2e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831
|| ||||| |||||||| ||| || | ||||| |||||||| || || ||||||| |
Sbjct 8669 GTGAAAACTGATATTCAGATTCCTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCATGT 8728
Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891
||| | ||||| | ||||| || || || || | || ||||| |||||| ||| |||
Sbjct 8729 TCTAGCTTGGCTGCAAAACATTTCATAGATGTAGAAGCTGGTGTCATAGATGAAGATTAT 8788
Query 31892 AGAGGAAACGTTGGAATTGT 31911
|||||||| ||||| ||||
Sbjct 8789 AGAGGAAATGTTGGTGTTGT 8808
>seq26090
Length=5153
Score = 100 bits (110), Expect = 2e-16
Identities = 152/213 (71%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 31769 CTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCT 31828
|| || |||||| | ||||| | || | ||||| ||||||||| | || |||||||
Sbjct 5050 CTTGTGAAAACCAACATTCACACAGCTCTTCCTTCTGGGTGCTACAGGAGAGTAGCTCCA 4991
Query 31829 AGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGAC 31888
||||| ||||| | ||| || | || || || || || ||||| | |||| |||
Sbjct 4990 CATTCTGGTTTGGCTGCAAAATACCTCATAGATGTAGGAGCTGGTGTCACAGATGAAGAT 4931
Query 31889 TATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGGAGAAAAATCATACAGTATAAAA 31948
||||||||||| ||||| || | |||||||||||| | ||| || | || | |||
Sbjct 4930 TATAGAGGAAATGTTGGTGTTCTACTGTTTAATTTTG--GCAAAGTC-TGAAG--TCAAA 4876
Query 31949 AAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981
||||| ||| | | || || || ||||| |||
Sbjct 4875 AAGGGTGATGGAATTGCACAGCTCATTTGTGAA 4843
>seq400361
Length=55729
Score = 98.7 bits (108), Expect = 8e-16
Identities = 100/130 (77%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
|||||||| || || ||||| || || || |||||||||||||||||||| || || |
Sbjct 42759 AAAATCTT---ACCAAATTTTCATTCACAATTCCGTCACTGGCTGCAAAAAAGGCTAAGA 42815
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||| ||||| |||| || || | ||||| || |||||||| || | ||| || |
Sbjct 42816 TGTGAGAGATAAAATACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 42875
Query 5041 TTAAATCAAC 5050
|||||||||
Sbjct 42876 ATAAATCAAC 42885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424856124320852
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